TCONS_00019019-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00019019-protein
Unique NameTCONS_00019019-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length587

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00019019-protein ID=TCONS_00019019-protein|Name=TCONS_00019019-protein|organism=Clytia hemisphaerica|type=polypeptide|length=587bp
MGKSEDKGLLNRGGGETINLRETSPEGSLCKDGGESSTSSLNDNAPWYIR
FWRREKLMIFIIIGVCLGFLVGISCNKPIQNLDQPIRKNVLLILGFPGEL
LMRMLKMLILPLIVSSLIVGLAELDQRASGRLGKRAVLYYMGTTMCAVIL
GIILVVAIYPGGNKQEAEGEKEDKRVRPLDSFLDLIRNMFPDNLVKACIA
QLVTGVKFEKHDERTTVWSSNETLADQMNWNHWEVNQTALQNQTNSEWKY
LTYQSVLNGTNVTMVKEWREVKMPDKPSDKGSTNVLGLVVFSIVVGLMLG
KMGKKGRVFVDWMIVLNDIVMELVGWVMWYSPIGIWSLISAKFASMNDIE
GTFEKLALYMVTVIVGLIIHSFLVLPAIFAVVTRKNPFRFATGLIKALLT
AFGTSSSSATLPVTFSCLEDNLRVDKRVTRFVLPIGATINMDGTALYEAV
GAIFIAQNSGLDLDFGQYVAVSLTATLASIGAAGIPQAGLVTMLIVLQTI
GLPEDAVTLILAVDWFLDRVRTTVNVLGDAYGAGIVHHLSQRELQQMDED
QKALDEVHRVEEGFENFTGKHDENPPNMNMYNGLTAL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010663XLOC_010663Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00019019TCONS_00019019Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001991Na-dicarboxylate_symporter
IPR018107Na-dicarboxylate_symporter_CS
Vocabulary: Molecular Function
TermDefinition
GO:0015293symporter activity
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0015293 symporter activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001991Sodium:dicarboxylate symporterPRINTSPR00173EDTRNSPORTcoord: 55..75
score: 24.32
coord: 431..457
score: 85.69
coord: 327..346
score: 47.3
coord: 364..383
score: 48.38
coord: 466..485
score: 67.16
coord: 493..513
score: 52.9
coord: 104..124
score: 68.85
coord: 133..158
score: 55.93
IPR001991Sodium:dicarboxylate symporterPFAMPF00375SDFcoord: 57..538
e-value: 3.7E-136
score: 454.1
IPR001991Sodium:dicarboxylate symporterGENE3D1.10.3860.10coord: 47..546
e-value: 8.7E-166
score: 551.2
IPR001991Sodium:dicarboxylate symporterSUPERFAMILY118215Proton glutamate symport proteincoord: 57..198
coord: 281..539
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..40
IPR018107Sodium:dicarboxylate symporter, conserved sitePROSITEPS00714NA_DICARBOXYL_SYMP_2coord: 434..457
IPR018107Sodium:dicarboxylate symporter, conserved sitePROSITEPS00713NA_DICARBOXYL_SYMP_1coord: 97..111

Blast
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BLAST of TCONS_00019019-protein vs. Swiss-Prot (Human)
Match: EAA2 (Excitatory amino acid transporter 2 OS=Homo sapiens GN=SLC1A2 PE=1 SV=2)

HSP 1 Score: 464.922 bits (1195), Expect = 3.120e-158
Identity = 263/529 (49.72%), Postives = 354/529 (66.92%), Query Frame = 0 
Query:   57 LMIFIIIGVCLGFLVGISCNKPIQNLDQPIRKNVLLILGFPGELLMRMLKMLILPLIVSSLIVGLAELDQRASGRLGKRAVLYYMGTTMCAVILGIILVVAIYPGG---NKQEAEGEKEDKRVRPLDSFLDLIRNMFPDNLVKACIAQLVTGVKFEKHDERTTVWSSNETLADQMNWNHWEVNQTALQNQTNSEWKYLTYQSVLNGTNVTMVKEWREVKMPDKPSDKGSTNVLGLVVFSIVVGLMLGKMGKKGRVFVDWMIVLNDIVMELVGWVMWYSPIGIWSLISAKFASMNDIEGTFEKLALYMVTVIVGLIIHSFLVLPAIFAVVTRKNPFRFATGLIKALLTAFGTSSSSATLPVTFSCLEDNLRVDKRVTRFVLPIGATINMDGTALYEAVGAIFIAQNSGLDLDFGQYVAVSLTATLASIGAAGIPQAGLVTMLIVLQTIGLPEDAVTLILAVDWFLDRVRTTVNVLGDAYGAGIVHHLSQRELQQMDEDQKALDEVHRVE-EGFENFTGKHDENPPNMNMY 581
            L+   + GV LG + G      +  L  PI  +V++++ FPG++LMRMLKMLILPLI+SSLI GL+ LD +ASGRLG RA++YYM TT+ A +LG+ILV+AI+PG     KQ   G+K D+ V  LD+FLDLIRN+FP+NLV+AC  Q+ T  K      +  V    +           E N T+               S+LN T VT V E  ++ +      K   NVLGL+ F I  G+ +GKMG + ++ VD+  +LN+IVM+LV  +MWYSP+GI  LI  K  ++ D+E    +L +YMVTVI+GLIIH  + LP I+ VVTRKNPF F  G+ +A +TA GT+SS+ TLPVTF CLE+NL +DKRVTRFVLP+GATINMDGTALYEAV AIFIAQ +G+ LD GQ V VSLTATLAS+GAA IP AGLVTML++L  +GLP + ++L++AVDW LDR+RT+VNV+GD++GAGIV+HLS+ EL  +D   +  +++   + +   +    H E+  N  +Y
Sbjct:   46 LLTLTVFGVILGAVCG-----GLLRLASPIHPDVVMLIAFPGDILMRMLKMLILPLIISSLITGLSGLDAKASGRLGTRAMVYYMSTTIIAAVLGVILVLAIHPGNPKLKKQLGPGKKNDE-VSSLDAFLDLIRNLFPENLVQACFQQIQTVTK------KVLVAPPPDE----------EANATS------------AVVSLLNET-VTEVPEETKMVIKKGLEFKDGMNVLGLIGFFIAFGIAMGKMGDQAKLMVDFFNILNEIVMKLVIMIMWYSPLGIACLICGKIIAIKDLEVVARQLGMYMVTVIIGLIIHGGIFLPLIYFVVTRKNPFSFFAGIFQAWITALGTASSAGTLPVTFRCLEENLGIDKRVTRFVLPVGATINMDGTALYEAVAAIFIAQMNGVVLDGGQIVTVSLTATLASVGAASIPSAGLVTMLLILTAVGLPTEDISLLVAVDWLLDRMRTSVNVVGDSFGAGIVYHLSKSELDTIDSQHRVHEDIEMTKTQSIYDDMKNHRESNSNQCVY 539
The following BLAST results are available for this feature:
BLAST of TCONS_00019019-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
EAA23.120e-15849.72Excitatory amino acid transporter 2 OS=Homo sapien... [more]
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