TCONS_00019008-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00019008-protein
Unique NameTCONS_00019008-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length303

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00019008-protein ID=TCONS_00019008-protein|Name=TCONS_00019008-protein|organism=Clytia hemisphaerica|type=polypeptide|length=303bp
MLKTDIFKIIESRNLKNLRTFLSKKPDAIHKTKNGNAPLHLAAQMEYSDV
MEILIQNGANVNKQNSIGRTALHISCAQGHYDGVLVLRDHDADPSIACIL
GDNALHEASKNGNIRIIKFLFNADFNINTQNKQNWSALHKAAFARKHDAV
EVLIQEGIDPFLKTSKNKTAYQITMELTCFDMAIEIEKYENRLLREKSLK
ANECDTPSKNSIDIAKIFDDGKNNLTNMFRFKKQPDNTRETEQSHVPADH
TTNENDTDVQQQSEENIFKTTTEKLKVLFTIPKPNTDSGKNNSQETTNVS
EEG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010652XLOC_010652Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00019008TCONS_00019008Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 100..129
e-value: 0.01
score: 25.1
coord: 67..96
e-value: 0.016
score: 24.4
coord: 34..63
e-value: 9.6E-5
score: 31.8
coord: 133..162
e-value: 0.24
score: 20.5
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 34..66
score: 14.426
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 100..132
score: 10.927
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 19..96
e-value: 3.3E-11
score: 43.5
coord: 100..162
e-value: 2.3E-10
score: 40.8
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 110..299
e-value: 1.6E-18
score: 66.3
IPR020683Ankyrin repeat-containing domainGENE3D1.25.40.20coord: 2..109
e-value: 1.3E-29
score: 102.4
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 34..165
score: 37.215
IPR020683Ankyrin repeat-containing domainSUPERFAMILY48403Ankyrin repeatcoord: 11..187
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 233..267
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 280..303
NoneNo IPR availableCDDcd00204ANKcoord: 30..154
e-value: 2.54741E-30
score: 110.936

Blast
[Close]
BLAST of TCONS_00019008-protein vs. Swiss-Prot (Human)
Match: ANK3 (Ankyrin-3 OS=Homo sapiens GN=ANK3 PE=1 SV=3)

HSP 1 Score: 90.1225 bits (222), Expect = 7.001e-20
Identity = 47/159 (29.56%), Postives = 82/159 (51.57%), Query Frame = 0 
Query:   16 KNLRTFLSKKPDAIHKTKNGNAPLHLAAQMEYSDVMEILIQNGANVNKQNSIGRTALHISCAQGHYDGVLVLRDHDADPSIACILGDNALHEASKNGNIRIIKFLFNADFNINTQNKQNWSALHKAAFARKHDAVEVLIQEGIDPFLKTSKNKTAYQIT 174
            K  +  L KK +   K  NG  PLH+A +     VME+L+++GA++      G T +H++   GH + V  L  H A P+   + G+ ALH A+++G   ++++L      +  + K + + LH +A   K D V+ L+Q+G  P   T+   T   ++
Sbjct:  381 KVAKVLLDKKANPNAKALNGFTPLHIACKKNRIKVMELLLKHGASIQAVTESGLTPIHVAAFMGHVNIVSQLMHHGASPNTTNVRGETALHMAARSGQAEVVRYLVQDGAQVEAKAKDDQTPLHISARLGKADIVQQLLQQGASPNAATTSGYTPLHLS 539

HSP 2 Score: 83.1889 bits (204), Expect = 1.455e-17
Identity = 46/159 (28.93%), Postives = 73/159 (45.91%), Query Frame = 0 
Query:   31 KTKNGNAPLHLAAQMEYSDVMEILIQNGANVNKQNSIGRTALHISCAQGHYDGVLVLRDHDADPSIACILGDNALHEASKNGNIRIIKFLFNADFNINTQNKQNWSALHKAAFARKHDAVEVLIQEGIDPFLKTSKNKTAYQITMELTCFDMAIEIEKY 189
            K K+   PLH++A++  +D+++ L+Q GA+ N   + G T LH+S  +GH D    L DH A  SI    G   LH A+K G + +   L     + +   K   + LH AA         +L+ +G  P        T   I  +    D+A  + +Y
Sbjct:  495 KAKDDQTPLHISARLGKADIVQQLLQQGASPNAATTSGYTPLHLSAREGHEDVAAFLLDHGASLSITTKKGFTPLHVAAKYGKLEVANLLLQKSASPDAAGKSGLTPLHVAAHYDNQKVALLLLDQGASPHAAAKNGYTPLHIAAKKNQMDIATTLLEY 653
The following BLAST results are available for this feature:
BLAST of TCONS_00019008-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ANK37.001e-2029.56Ankyrin-3 OS=Homo sapiens GN=ANK3 PE=1 SV=3[more]
back to top