TCONS_00018991-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00018991-protein
Unique NameTCONS_00018991-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length267

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00018991-protein ID=TCONS_00018991-protein|Name=TCONS_00018991-protein|organism=Clytia hemisphaerica|type=polypeptide|length=267bp
MSNTLMRRGEMNGIEVARSAQNITMNFPIAPIVFSSCGSFLGLAYLLKKK
SFPKYLKDPGRRNAWLWRNTFCSLIHSCASAVWTFFCYYDEPKLLGDMVN
TTTNLSIQLLSFSTGYFMYDFLDVVLNDGFRQVFILTHHTAVITAFSLAL
TNERYMGFGVCALIMEFNSIFLHIRRLMKLVNHSSGWKSINGVFLLLTML
FCRICLSCWMVRWLLQNRDLLQYSHYVVGLVGMVIMTVTNVGLMYRLWMS
DFHKKSINKKVLSEIKK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010645XLOC_010645Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00018991TCONS_00018991Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006634TLC-dom
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006634TRAM/LAG1/CLN8 homology domainSMARTSM00724lag1_27coord: 62..256
e-value: 6.8E-17
score: 72.1
IPR006634TRAM/LAG1/CLN8 homology domainPFAMPF03798TRAM_LAG1_CLN8coord: 67..247
e-value: 8.7E-19
score: 67.9
IPR006634TRAM/LAG1/CLN8 homology domainPROSITEPS50922TLCcoord: 62..261
score: 23.624

Blast
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BLAST of TCONS_00018991-protein vs. Swiss-Prot (Human)
Match: TLCD1 (Calfacilitin OS=Homo sapiens GN=TLCD1 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.079e-17
Identity = 65/227 (28.63%), Postives = 113/227 (49.78%), Query Frame = 0 
Query:   39 SFLGLAYLLKKKSFPKYLK-DPGRRNAWLWRNTFCSLIHSCASAVWTFFCYYDEPKLLGDMVNTTTNLSIQLL-SFSTGYFMYDFLDVVLNDGFRQVF-ILTHHTAVITAFSLALTNERYMGFGVCALIMEFNSIFLHIRRLMKLVNHSSG--WKSINGVFLLLTMLFCRICLSCWMVRWLLQNRDLLQYSHYVVGLVGMVIMTVTNVGLMYRLWMSDFHKKSINKK 260
            +F  L   L +   P +++ DP R   W W N   S  HS  S +W   C +  P +L + + T  +LS  LL  FS GYF++D +D+V +   R  +  L HH   + AF   +    ++G GV  L++E ++IFL IR +MK+ N      ++    V L++  LF R+    ++  + L+  +      +++G+  ++++ V  +    RL  SDF  + + KK
Sbjct:   18 TFRALRRALCRLPLPVHVRADPLR--TWRWHNLLVSFAHSIVSGIWALLCVWQTPDMLVE-IETAWSLSGYLLVCFSAGYFIHDTVDIVASGQTRASWEYLVHHVMAMGAFFSGIFWSSFVGGGVLTLLVEVSNIFLTIRMMMKISNAQDHLLYRVNKYVNLVMYFLF-RLAPQAYLTHFFLRYVNQRTLGTFLLGI--LLMLDVMIIIYFSRLLRSDFCPEHVPKK 238
The following BLAST results are available for this feature:
BLAST of TCONS_00018991-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TLCD12.079e-1728.63Calfacilitin OS=Homo sapiens GN=TLCD1 PE=2 SV=1[more]
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