TCONS_00018973-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00018973-protein
Unique Name	TCONS_00018973-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	350

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00018973-protein ID=TCONS_00018973-protein|Name=TCONS_00018973-protein|organism=Clytia hemisphaerica|type=polypeptide|length=350bp
MPTNILILAKLGAGTGNRTTAERIRQHLNNSDLCPLLCDVTQFRSPRDLS
DYVIHNDVTCLIVIHAYRAGKFLNDISIPFALVFGGTDVQCSSWNDQENA
IMADVVAKAIVLIAFSEVMKEAASVKWPSILKEKKIFVQPQGVTIERIGP
TNYSFQHLFNDNGMSEVKTKEKIIFLFVGGIRPVKDPLFLIYTFAQMHEE
NDRILFVIIGPILDEEYARKCRLATSKLKGIYMFDQISRDKVHALIHQSV
ALVNSSIEEGMAGAILESMKIETPVVVRNNRGNASIVQHQSTGLLFQHPQ
DFREQANLLLENSTLRRNLIQNAQDFIESNHNPDVERSTYHEIIKILVKP

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_010638	XLOC_010638	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00018973	TCONS_00018973	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001296	Glyco_trans_1

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.2000		coord: 128..329 e-value: 4.4E-30 score: 104.2
None	No IPR available	SUPERFAMILY	53756	UDP-Glycosyltransferase/glycogen phosphorylase	coord: 63..344
IPR001296	Glycosyl transferase, family 1	PFAM	PF00534	Glycos_transf_1	coord: 166..324 e-value: 4.2E-25 score: 88.2

Blast

[Close]

BLAST of TCONS_00018973-protein vs. Swiss-Prot (Human)
Match: GL1D1 (Glycosyltransferase 1 domain-containing protein 1 OS=Homo sapiens GN=GLT1D1 PE=2 SV=2)

HSP 1 Score: 234.572 bits (597), Expect = 7.872e-75
Identity = 117/343 (34.11%), Postives = 196/343 (57.14%), Query Frame = 0

Query:    5 ILILAKLGAGTGNRTTAERIRQHLNNSDLCPLLCDVTQFRSPRDLSDYVIHNDVTCLIVIHAYRAGKFLNDISIPFALVFGGTDVQCSSWNDQENAIMADVVAKAIVLIAFSEVMKEAASVKWPSILKEKKIFVQPQGVTIERIGPTNYSFQHLFNDNGMSEVKTKEKIIFLFVGGIRPVKDPLFLIYTFAQMHEENDRILFVIIGPILDEEYARKCRLATSKLKGIYMFDQISRDKVHALIHQSVALVNSSIEEGMAGAILESMKIETPVVVRNNRGNASIVQHQSTGLLFQHPQDFREQANLLLENSTLRRNLIQNAQDFIESNHNPDVERSTYHEIIKIL 347
            +L LA L   TGN  TA+R+R HL  +    +L D   F S  ++++ ++  +    + +H YR G+ L    IPF ++FGGTDV   +   ++N +M  V+ +A   +AF+E MKE A  +WP    + K++VQ QG+        N++    F              IFL + G+R VKDPL+L+  F+  H+E   +  VI+GP +D  + R+ +    +  G+ +  ++ ++ +HA++    A+VNSS+ EGM+ AILE+M +E PV+ RN  GNA++V+H+ TGLLF +PQ+F   A  L+ +  L + ++ N ++++   H+  VER TY ++I+ L
Sbjct:    3 LLFLAVLRPHTGNAVTAQRVRAHLEAAGHVCVLKDAFDFESRSEIANLILAENCEAALALHLYRGGRLLQGHRIPFGVIFGGTDVNEDANQAEKNTVMGRVLEEARFAVAFTESMKEMAQAQWPH--AKGKVYVQSQGIATTPNAAFNWN---TFLQRSEINQSADNLHIFLLICGLRQVKDPLYLVDAFSAWHQEEPNVHLVIVGPEVDPVFTREVKAKVKRAAGVRLIGEMPQEDLHAVVKNCFAVVNSSVSEGMSAAILEAMDLEVPVLARNIPGNAAVVKHEVTGLLFSNPQEFVHLAKRLVSDPALEKEIVVNGREYVRMYHSWQVERDTYQQLIRKL 340

The following BLAST results are available for this feature:

BLAST of TCONS_00018973-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00018973-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
GL1D1	7.872e-75	34.11	Glycosyltransferase 1 domain-containing protein 1 ...	[more]

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TCONS_00018973-protein (polypeptide) - C. hemisphaerica