TCONS_00018701-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00018701-protein
Unique NameTCONS_00018701-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length770

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00018701-protein ID=TCONS_00018701-protein|Name=TCONS_00018701-protein|organism=Clytia hemisphaerica|type=polypeptide|length=770bp
MNDYVELENKEDGIYKLNAVLIHRGLSANSGHYIAHIWDEEQGVWSRFND
EEVEEMKSKTLELGKEDDLEGIENKKEKKEKKSEKEPGHQSKNSYMLVYV
KNGEESPSSINPPENMLEIVAKDNSFFDEWVDTVKSKRNEKLSIGSERQK
EVQGLFSRLPVRENDSDYDWISTKWLRRWLSTDDGPVPPIDNTELMCIHS
CVDPSKLNLLKRVSGTTADDLFNKYGGLPRFKSEALCKKCEEFLKRKKEF
FNKLTDDLKIFAKCSKTTYKVDSAKCYWVGKKTLKQMKQLATKEFMDSYG
MSNSAATPTSTPTTSSSRTPVQKTVDDDANDKNNNDSQDRTLDENSSLNL
SNNNSSSKKVKPPSQHLVAFNEDIVCLDHGNLNLQSSSRILISEEDWARC
LEYFPSATSFASDTPMCIECINIQKSNEEFKEVEKMQALEQRDCLSFLFE
SQNDRTAKLQTMDNGAFHVIPMSFIQNWRRKIKYNKLLEEEIDNSEMICE
HDLSLYSAEEIVDEVYKDEPEITFIDEGEQNKLKTFFKYQQPVTVSMIKS
STTNGNGQTVYETFYESQPTYCKECRSLRLAEEAFDMKSYENQPIYVQKL
TEKEQHNYTVDESKKNTDDEAIDELVEISVTGSKAFLKHQKREFSEAAEF
VPNKKFKNDTSENARRSSRHRRKRGEYIVHVNSTHTLKQLKVQLLTLFSV
FPLEQVLTFPNGYVLTEDDKELGELGVEPHMHLYLSVAQPDKDSIDTVPP
GKERTLESGFKGTNLVSVGK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010456XLOC_010456Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00018701TCONS_00018701Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001394Peptidase_C19_UCH
IPR006615Pept_C19_DUSP
IPR018200USP_CS
IPR000626Ubiquitin_dom
IPR028889USP_dom
IPR029071Ubiquitin-rel_dom
Vocabulary: Biological Process
TermDefinition
GO:0016579protein deubiquitination
GO:0006511ubiquitin-dependent protein catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0036459thiol-dependent ubiquitinyl hydrolase activity
GO:0004843thiol-dependent ubiquitin-specific protease activity
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016579 protein deubiquitination
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
molecular_function GO:0005515 protein binding
molecular_function GO:0004843 thiol-dependent ubiquitin-specific protease activity
molecular_function GO:0036459 thiol-dependent ubiquitinyl hydrolase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.20.90coord: 650..746
e-value: 4.1E-5
score: 22.8
NoneNo IPR availableGENE3D3.90.70.10coord: 2..112
e-value: 1.4E-18
score: 66.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 301..363
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 58..94
NoneNo IPR availableSUPERFAMILY54001Cysteine proteinasescoord: 9..106
IPR001394Peptidase C19, ubiquitin carboxyl-terminal hydrolasePFAMPF00443UCHcoord: 9..99
e-value: 3.7E-12
score: 46.2
IPR006615Peptidase C19, ubiquitin-specific peptidase, DUSP domainGENE3D3.30.2230.10coord: 424..564
e-value: 3.9E-4
score: 19.6
IPR006615Peptidase C19, ubiquitin-specific peptidase, DUSP domainSUPERFAMILY143791DUSP-likecoord: 147..229
IPR018200Ubiquitin specific protease, conserved sitePROSITEPS00973USP_2coord: 15..33
IPR000626Ubiquitin domainPROSITEPS50053UBIQUITIN_2coord: 679..742
score: 8.982
IPR028889Ubiquitin specific protease domainPROSITEPS50235USP_3coord: 1..102
score: 15.355
IPR029071Ubiquitin-related domainSUPERFAMILY54236Ubiquitin-likecoord: 675..737

Blast
[Close]
BLAST of TCONS_00018701-protein vs. Swiss-Prot (Human)
Match: UBP48 (Ubiquitin carboxyl-terminal hydrolase 48 OS=Homo sapiens GN=USP48 PE=1 SV=1)

HSP 1 Score: 345.895 bits (886), Expect = 3.522e-105
Identity = 233/778 (29.95%), Postives = 380/778 (48.84%), Query Frame = 0 
Query:    1 MNDYVELENKEDGIYKLNAVLIHRGLSANSGHYIAHIWDEEQGVWSRFNDEEVEEMKSKTLELGKEDDLEGIENKKEKKEKKSEKEPGHQSKNSYMLVYVKNGEESP-SSINPPENMLEIVAKDNSFFDEWVDTVKSKRNEKLSIGSERQKEVQGLFSRLPVRENDSDYDWISTKWLRRWLSTDDGPVPPIDNTELMCIHSCVDPSKLNLLKRVSGTTADDLFNKYGGLPRFKSEALCKKCEEFLKRKKEFFNKLTDDLKIFAKCSKTTYKVDSAKCYWVGKKTLKQMKQLATKEFMDSYGMSNSAATPTSTPTTSSSRTPVQKTVDDDANDKNNNDSQDRTLDENSSLNLSNNNSSSKKVKPPSQHLVAFNEDIVCLDHGNLNLQSSSRILISEEDWARCLEYFPSATSFASDTPMCIECINIQKSNEEFKEVEKMQALEQRDCLSFLFESQNDRTAKLQTMDNGAFHVIPMSFIQNWRRKIKYNKLLE--EEIDNSEMICEHDLSLYSAEEIVDEVYKDEPEITFIDEGEQNKLKTFFKYQQPVTVSMIKSSTTNGNGQTVYETFYESQPTYCKECRSLRLAEEAFDMKSYENQPIYVQKLTEKE--------QHNYTVDESKKNTDDEAIDELVEISVTGSKAFLKHQKREFSEAAEFVPNKKFKNDTSENARRSSRHRRKRGEYIVHVNSTHTLKQLKVQLLTLFSVFPLEQVLTFPNGYVLTEDDKELGELGVEPHMHLYLSVAQPDKDSIDTVPPGKERTLESGFKGTNLVS 767
            M  YVE +     +Y+L+AVLIHRG+SA SGHYIAH+ D + G W +FNDE++E+M+ K L+LG E+DL   E  K +  K    +  H S+N+YMLVY    +E P +++  P  + E+V +DNS F+EW   +   R + +  G  + +EV+ L+ RLP       Y+++S +WL++WL  +  P  PIDN   +C H  + P K++++KR+S   AD  +++YGG PR   +ALCK+C     R     N+L +D K      K   K      +WVGK +L+  +QLA ++                                    D+ + D++      N  +N S  N    K +   +  + FNEDI+C  HG L +  + R L+S+E W++  +YFP A  F S    C +C  +++  EE + + KM A EQ+  L  LF+ +N         D    +++   F++ WR+ ++          + NS ++C H   +++   +  E   D   I  I   E   ++  F     + ++ I+    N +     ET Y S+P  C ECR   L ++  D++ Y    IYV K+ + +        + N +  E++++ ++   D   +     S    K QK         + ++ +     +  RRS RHR+ RGE  + V++  TLK+LK+Q++  FSV P +Q L+  +G +L++D   LG LGV P   + L   +P  D        +    E GFKGT L+ 
Sbjct:  323 MEPYVEHKGG-SYVYELSAVLIHRGVSAYSGHYIAHVKDPQSGEWYKFNDEDIEKMEGKKLQLGIEEDLA--EPSKSQTRKPKCGKGTHCSRNAYMLVYRLQTQEKPNTTVQVPAFLQELVDRDNSKFEEWCIEMAEMRKQSVDKGKAKHEEVKELYQRLPA--GAEPYEFVSLEWLQKWLD-ESTPTKPIDNHACLCSHDKLHPDKISIMKRISEYAADIFYSRYGGGPRLTVKALCKECVVERCRILRLKNQLNEDYKTVNNLLKAAVKGSDG--FWVGKSSLRSWRQLALEQL-----------------------------------DEQDGDAE----QSNGKMNGSTLNKDESKEERKEEEELNFNEDILC-PHGELCISENERRLVSKEAWSKLQQYFPKAPEFPSYKECCSQCKILEREGEENEALHKMIANEQKTSLPNLFQDKNRPCLSNWPEDTDVLYIVSQFFVEEWRKFVRKPTRCSPVSSVGNSALLCPHGGLMFTFASMTKE---DSKLIALIWPSEWQMIQKLFVVDHVIKITRIEVGDVNPS-----ETQYISEPKLCPECREGLLCQQQRDLREYTQATIYVHKVVDNKKVMKDSAPELNVSSSETEEDKEEAKPDGEKDPDFNQSNGGTKRQK---------ISHQNYIAYQKQVIRRSMRHRKVRGEKALLVSANQTLKELKIQIMHAFSVAPFDQNLSI-DGKILSDDCATLGTLGVIPESVILLKADEPIADYAAMDDVMQVCMPEEGFKGTGLLG 1034
The following BLAST results are available for this feature:
BLAST of TCONS_00018701-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
UBP483.522e-10529.95Ubiquitin carboxyl-terminal hydrolase 48 OS=Homo s... [more]
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