TCONS_00018694-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00018694-protein
Unique NameTCONS_00018694-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1858

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00018694-protein ID=TCONS_00018694-protein|Name=TCONS_00018694-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1858bp
AEDSKKAKSNEEEPVNQSAVICQTHNLIDVNAEIPDDLIGNITYKQFNRI
VRKKVVESNPDASGLHVTSLVGAKWREFKELYGMETRSDTPDLERLKNQA
VASPFSDADKSSMPTSPDSLQIADSGAEESGDEDYMEDDPSDLKLKIMRR
GNKVYRAGDRKTSRQSKKTARQGLVNLDDINLDDLGQDDQDESSQEANSK
KKPAKKRTGPRIKNTKEIQEKKKAKKAAAAAAAQAARVAKAAGKKGGKKD
GPPAQPEHNSVCDVCAEGGDILLCDTCTCSWHMTCLDPPLDEVPEGQWSC
PKCVAEMNGQIEEEEDEEETFHGDYCKICKDGGELLCCDFCPGTYHMRCV
KPQLISVPEGEWKCPMCKVDDLPEKVERILFWKFYTHKPTAEEVANGAKD
EPYKVRKFFVKYANMSYWKCHWIDELQIEKFHVSLYRFFCRKNDMNDPPM
TEEGTVEGGEDINVDEKEHLRNMDQRFYQYGIKPEWLQMHRIIWHRDLKK
QGGTQYLVKWKEIGYDAATWEFKSDEDNKDIPDFQKMIDDYNNLRTAHKK
RQKSKNKASKKRDGWELDIKPNEYNFEEQPKFITDTGGRLHEYQIEGINW
IRYSWGQRENTILADEMGLGKTIQTITYLNSLFKEGRCDGPFLICAPLST
LVNWEREFEFWAPDMYCVTYTGHRENRVVIRNYEMCFDEDNIRKGHKAYK
MKSGTPVKFHALLTSYELVAIDAATLQSINWKVLVIDEAHRLKNNQSKFF
RTMNGYSIGYTLLLTGTPLQNNLEELFHLLNFLCPDKFIQRETFLAEFED
IGKEDQIKKLHEMLGPHMLRRLKADVLKGMPTKSEFIVRVELSPMQKKFY
KFILTKNFGALNAKGSAQVSLLNVVMELKKCCNHPYLFATAAAEAPRYQT
NAFEVKALTEASGKLVLMCKMLQKLKAQGHRVLIFSQMTRVLDLLEDFFE
GHMWRYERLDGTITGMVRQAAIDRFNQPNSDIFAFLLSTRAGGLGINLAT
ADTVIIFDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTKGTVEERITQV
AKRKMMLTHLVVRPGLGSKAAQTMSKRELDDILKFGTEEMFKDDEENDGR
IVYDDKAIELLLDRSKEGIQEKEGGMDEYLSSFKVANYTVKDKDEPDVEV
LKQEEVIDNTYWEKLLRHHYEQEQEYIASTLGKGKRVRKQVNYSDGALAA
ETKIRQGYDDSDFDASELVDDSDGSEEETSNLTARQKKFRERDVLPPLLA
KVGNQLEVYGFNPRQRRAFLTAVMRYGLPPRDFKTARDKWCIHNLRGKTE
KAFQAYTSMFLRHLCEPMHDNKAEAYSDGVPREGVNRLQVLSRVGIMSLI
RRKVEEYSSINTFLQNVLQQHISDHPPSLEKLADEIRNANHDPEDKSKKP
EEASNATNEEKDGDKENAKEGDKENVKEGDKNIDGKKKDEEPPEEKSEKA
VVKDEKEETGEKEEGGEKKEKKESEEAKAMEVDGEEKKTPKENGIKEATS
EKMDVDESPVDSKANGEEKVNGEKVASELKKEVNGSTETTETKDVKPENT
ATTPKTETPTTEAPKAETIHKPDGIPKTEGAQPGTAPVPVMKAPEARVVN
DVTLPLFMFNIADGGFTELHVLWEAEEKRKIDNIWWRYHDYWLLAGVVVH
GYGRWQDILNDIRFDTINRPFSRMTLDYKNKFIARRFKLLEQALIVEEQM
KRSTFKNIQQSTTHQVMSLQSRFAELECLAESHQHLSKESLAGNKPANAV
LHKVLNQLESILSDMKNDVIRLPTTLAKMPPITNRLDMSERAVLTRLTTG
GQINPDSIATVLQPPGPVQQQSAPVQQPSAPVQQPPAPLQQPPAPVQQPP
APALFSPK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010455XLOC_010455Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00018694TCONS_00018694Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000953Chromo/chromo_shadow_dom
IPR001650Helicase_C
IPR009463DUF1087
IPR001965Znf_PHD
IPR009462DUF1086
IPR014001Helicase_ATP-bd
IPR012958CHD_N
IPR019787Znf_PHD-finger
IPR013083Znf_RING/FYVE/PHD
IPR023780Chromo_domain
IPR000330SNF2_N
IPR011989ARM-like
IPR012957CHD_C2
IPR019786Zinc_finger_PHD-type_CS
IPR011011Znf_FYVE_PHD
IPR016197Chromodomain-like
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005524 ATP binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000953Chromo/chromo shadow domainSMARTSM00298chromo_7coord: 485..539
e-value: 0.0048
score: 26.1
coord: 372..443
e-value: 3.7E-4
score: 29.8
IPR000953Chromo/chromo shadow domainPROSITEPS50013CHROMO_2coord: 487..553
score: 11.291
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 943..1027
e-value: 1.1E-20
score: 84.7
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 914..1027
e-value: 2.0E-18
score: 66.7
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 917..1082
score: 17.854
IPR009463Domain of unknown function DUF1087SMARTSM01147DUF1087_2coord: 1137..1201
e-value: 2.6E-28
score: 110.1
IPR009463Domain of unknown function DUF1087PFAMPF06465DUF1087coord: 1143..1196
e-value: 1.3E-20
score: 73.1
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 261..304
e-value: 2.9E-11
score: 53.4
coord: 325..368
e-value: 1.7E-12
score: 57.5
IPR009462Domain of unknown function DUF1086SMARTSM01146DUF1086_2coord: 1213..1368
e-value: 1.5E-73
score: 260.3
IPR009462Domain of unknown function DUF1086PFAMPF06461DUF1086coord: 1234..1362
e-value: 2.6E-39
score: 134.1
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 586..794
e-value: 1.3E-29
score: 114.3
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 602..786
score: 22.009
IPR012958CHD, N-terminalPFAMPF08073CHDNTcoord: 38..80
e-value: 3.3E-7
score: 30.0
IPR019787Zinc finger, PHD-fingerPFAMPF00628PHDcoord: 261..305
e-value: 6.9E-9
score: 35.4
coord: 325..369
e-value: 2.7E-8
score: 33.5
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 259..306
score: 10.193
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 323..370
score: 9.864
NoneNo IPR availableGENE3D3.40.50.300coord: 899..1065
e-value: 2.9E-38
score: 130.3
NoneNo IPR availableGENE3D2.40.50.40coord: 378..442
e-value: 4.4E-8
score: 32.5
NoneNo IPR availableGENE3D3.40.50.10810coord: 553..830
e-value: 2.2E-46
score: 157.4
NoneNo IPR availableGENE3D2.40.50.40coord: 479..552
e-value: 5.1E-11
score: 41.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1390..1588
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1803..1858
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 102..232
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1212..1237
NoneNo IPR availableCDDcd15531PHD1_CHD_IIcoord: 262..303
e-value: 3.91551E-18
score: 80.3387
NoneNo IPR availableCDDcd00079HELICccoord: 912..1035
e-value: 5.62928E-27
score: 108.479
NoneNo IPR availableCDDcd15532PHD2_CHD_IIcoord: 325..367
e-value: 7.19731E-24
score: 96.5807
NoneNo IPR availableCDDcd00046DEXDccoord: 609..768
e-value: 2.54525E-20
score: 89.3188
NoneNo IPR availableCDDcd00024CHROMOcoord: 490..543
e-value: 1.8246E-6
score: 46.4883
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 256..319
e-value: 7.4E-17
score: 60.5
coord: 320..377
e-value: 9.3E-16
score: 57.0
IPR023780Chromo domainPFAMPF00385Chromocoord: 490..543
e-value: 2.3E-9
score: 36.9
IPR000330SNF2-related, N-terminal domainPFAMPF00176SNF2_Ncoord: 607..887
e-value: 5.0E-57
score: 193.1
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1388..1801
e-value: 0.056
score: 11.3
IPR012957CHD, C-terminal 2PFAMPF08074CHDCT2coord: 1632..1797
e-value: 1.0E-71
score: 240.5
IPR019786Zinc finger, PHD-type, conserved sitePROSITEPS01359ZF_PHD_1coord: 262..303
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 312..374
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 255..308
IPR016197Chromo domain-likeSUPERFAMILY54160Chromo domain-likecoord: 472..543
IPR016197Chromo domain-likeSUPERFAMILY54160Chromo domain-likecoord: 338..450
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 573..821
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 823..1100

Blast
BLAST of TCONS_00018694-protein vs. Swiss-Prot (Human)
Match: CHD3 (Chromodomain-helicase-DNA-binding protein 3 OS=Homo sapiens GN=CHD3 PE=1 SV=3)

HSP 1 Score: 1530 bits (3960), Expect = 0.000e+0
Identity = 843/1693 (49.79%), Postives = 1088/1693 (64.26%), Query Frame = 0
Query:  183 DDLGQDDQDESSQEANSKKKPAKKRTGP-RIKNTKEIQEKKKAKKAAAAAAAQAARVAKAAGKKGGKKDGPPAQPEHNSVCDVCAEGGDILLCDTCTCSWHMTCLDPPLDEVPEGQWSCPKCVAE-------------MNGQIEEEEDEEETFHGDYCKICKDGGELLCCDFCPGTYHMRCVKPQLISVPEGEWKCPMCKVDDLPEKVERILFWKFYTHKPTA---EEVANGAKDEP-------YKVRKFFVKYANMSYWKCHWIDELQIEKFHVSLYRFFCRKNDMNDPPMTEEGTVE--GGEDINVDEKEHLRNMDQRFYQYGIKPEWLQMHRIIWHRDLKKQGGTQYLVKWKEIGYDAATWEFKSDEDNKDIPDFQKMIDDYNNLRTAHKKRQKSKNKASKKRDG-WELDIKPNE------YNFEEQPKFITDTGGRLHEYQIEGINWIRYSWGQRENTILADEMGLGKTIQTITYLNSLFKEGRCDGPFLICAPLSTLVNWEREFEFWAPDMYCVTYTGHRENRVVIRNYEMCFDEDNIRKGHKAYKMKSGTPVKFHALLTSYELVAIDAATLQSINWKVLVIDEAHRLKNNQSKFFRTMNGYSIGYTLLLTGTPLQNNLEELFHLLNFLCPDKFIQRETFLAEFEDIGKEDQIKKLHEMLGPHMLRRLKADVLKGMPTKSEFIVRVELSPMQKKFYKFILTKNFGALNAKGSA-QVSLLNVVMELKKCCNHPYLFATAAAEAPRYQTNAFEVKALTEASGKLVLMCKMLQKLKAQGHRVLIFSQMTRVLDLLEDFFEGHMWRYERLDGTITGMVRQAAIDRFNQPNSDIFAFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQQNKVMIYRFVTKGTVEERITQVAKRKMMLTHLVVRPGLGSKAAQTMSKRELDDILKFGTEEMFKDD------EENDGRIVYDDKAIELLLDRSKEGIQEKE-GGMDEYLSSFKVANYTVKDKDEPDVEVLKQEEV---IDNTYWEKLLRHHYEQEQEYIASTLGKGKRVRKQVNYSDGALAAETKIRQGYDDSDFD-ASELVDDSDGSEEETSNLTARQKKFRERDVLPPLLAKVGNQLEVYGFNPRQRRAFLTAVMRYGLPPRDFKTARDKWCIHNLRGKTEKAFQAYTSMFLRHLCEPMHDNKAEAYSDGVPREGVNRLQVLSRVGIMSLIRRKVEEYSSINTFLQNVLQQHISDHPPSLEKLADEIRNANHDPEDKSKKPEEASNATNEEKDGDKENAKEGDKENVKEGDKNIDGKKKDEEP-PEEKSEKAVVKDEKEETGEKEEGGEKKEKKESEEAKAMEVDGEEKKTPKENGIKEATSEKMDVDESPVDSKANGEEKVNGEKVASELKKEVNGSTETTETKDVKPENTATTPKTETPTTEAPKAET--IHKPDGIPKTEGAQPGTAPVPVMKAPEARVVNDVTLPLFMFNIADGGFTELHVLWEAEEKR-----KIDNIWWRYHDYWLLAGVVVHGYGRWQDILNDIRFDTINRPFSRMT-----LDYKNKFIARRFKLLEQALIVEEQMKRSTFKNIQQSTTHQVMSLQSRFAELECLAESHQHLSKESLAGNKPANAVLHKVLNQLESILSDMKNDVIRLPTTLAKMPPITNRLDMSERAVLTRLTTGGQINPDSIATVLQPPGP 1817
            D+  + + +ES  ++ S    + +  GP R K  K  +  +K KK     A              G+++    + +H   C+VC +GG+I+LCDTC  ++H+ CLDP LD  PEG+WSCP C  E                  EE E EEE  H +YC++CKDGGELLCCD C  +YH+ C+ P L  +P GEW CP C    L  +V++IL W+ +   P A    + A+G  D P          R+FFVK+  +SYW C W  ELQ+E FH+ +YR + RKNDM++PP  + G+ E  G  D    +  H   M++++Y++GIKPEW+ +HRII H  + K+G   YLVKW+++ YD +TWE    ED  +IP++++    Y   R        ++ +  KK+    + D  P+         +E QP+FIT TGG LH YQ+EG+NW+R+SW Q  +TILADEMGLGKTIQTI +L SL+KEG   GPFL+ APLST++NWEREF+ WAP  Y VTYTG +++R +IR  E  F+++ I+ G KA+KMK    VKFH LLTSYEL+ ID A L SI W  LV+DEAHRLKNNQSKFFR +NGY I + LLLTGTPLQNNLEELFHLLNFL P++F   E FL EF DI KEDQIKKLH++LGPHMLRRLKADV K MP K+E IVRVELSPMQKK+YK+ILT+NF ALN++G   QVSLLN++M+LKKCCNHPYLF  AA E+P+  + A+E  AL ++SGKL+L+ KML+KLK QGHRVLIFSQMT++LDLLEDF +   ++YER+DG ITG +RQ AIDRFN P +  F FLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQ NKVMIYRFVT+ +VEERITQVAKRKMMLTHLVVRPGLGSKA  +MSK+ELDDILKFGTEE+FKD+      EE+   I YD++AI  LLDR+++  ++ +   M+EYLSSFKVA Y V+++D+ +    +  +    +D  YWEKLLRHHYEQ+QE +A  LGKGKRVRKQVNY+D A   +       + S++   SE  D+      E    + RQ +  +   LPPLLA+VG  +EV GFN RQR+AFL AVMR+G+PP+D  T   +W + +LRGKTEK F+AY S+F+RHLCEP  D  +E ++DGVPREG++R QVL+R+G+MSL+++KV+E+            +HI+      E + D        P   SK+   AS+ T       + +A             N     K   P P EK E      EKEE   +E    +K +K S   + ME + +        G      E+++  + P++ +  G   V GE    E +    G  E + T+    E     P       E P+ ET  + K + +      +PG    P       R       P FMFNIADGGFTELH LW+ EE+      K++ IW R HDYWLLAG+V+HGY RWQDI ND +F  IN PF         L+ KNKF+ARRFKLLEQAL++EEQ++R+ + N+ Q   H  M+L +RFAE ECLAESHQHLSKESLAGNKPANAVLHKVLNQLE +LSDMK DV RLP TL+++PPI  RL MSER++L+RL + G    +   T   PPGP
Sbjct:  314 DEGPEPEAEESDLDSGSVHSASGRPDGPVRTKKLKRGRPGRKKKKVLGCPAV------------AGEEEVDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQWEAKEEEEEYEEEGEEEGEKEEEDDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCTCPVLKGRVQKILHWR-WGEPPVAVPAPQQADGNPDVPPPRPLQGRSEREFFVKWVGLSYWHCSWAKELQLEIFHLVMYRNYQRKNDMDEPPPLDYGSGEDDGKSDKRKVKDPHYAEMEEKYYRFGIKPEWMTVHRIINH-SVDKKGNYHYLVKWRDLPYDQSTWE----EDEMNIPEYEEHKQSYWRHRELIMGEDPAQPRKYKKKKKELQGDGPPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEALNSRGGGNQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKSSGKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKAG-SMSKQELDDILKFGTEELFKDENEGENKEEDSSVIHYDNEAIARLLDRNQDATEDTDVQNMNEYLSSFKVAQYVVREEDKIEEIEREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRVRKQVNYNDAAQEDQD------NQSEYSVGSEEEDEDFDERPEGRRQSKRQLRNEKDKPLPPLLARVGGNIEVLGFNTRQRKAFLNAVMRWGMPPQDAFTT--QWLVRDLRGKTEKEFKAYVSLFMRHLCEPGADG-SETFADGVPREGLSRQQVLTRIGVMSLVKKKVQEF------------EHINGRWSMPELMPD--------PSADSKRSSRASSPTKTSPTTPEASAT------------NSPCTSKPATPAPSEKGEGIRTPLEKEEAENQE----EKPEKNSRIGEKMETEADAPSPAPSLG------ERLEPRKIPLEDEVPG---VPGE---MEPEPGYRGDREKSATESTPGERGEEKPLDGQEHRERPEGETGDLGKREDVKGDRELRPGPRDEP---RSNGRREEKTEKPRFMFNIADGGFTELHTLWQNEERAAISSGKLNEIWHRRHDYWLLAGIVLHGYARWQDIQNDAQFAIINEPFKTEANKGNFLEMKNKFLARRFKLLEQALVIEEQLRRAAYLNLSQEPAHPAMALHARFAEAECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTRLPATLSRIPPIAARLQMSERSILSRLASKGT---EPHPTPAYPPGP 1924          
The following BLAST results are available for this feature:
BLAST of TCONS_00018694-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CHD30.000e+049.79Chromodomain-helicase-DNA-binding protein 3 OS=Hom... [more]
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