TCONS_00018678-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00018678-protein
Unique Name	TCONS_00018678-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	470

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00018678-protein ID=TCONS_00018678-protein|Name=TCONS_00018678-protein|organism=Clytia hemisphaerica|type=polypeptide|length=470bp
MPKKLPFEVIHVSGHDEGYSGKELEVHSPTTRGWQSLRFCEYPQEIIFSL
KEQCKITKIQVLSHQHNIGSKIEFFIGESKEQSLRSCSFSRLGYVQLAPN
AEANYQARELKSVTLNKDGIFVKILVHRNHINKLNVYNQVGLVAVNILGY
QLSKEFEGQHPQEKTEDVVNFYMNQVTSEDEVVNTSKLNASPRYEYGKEI
SPYDDLAFDMYQDSETAQLIRKLDEKKHQAIIEERYDYAKKLKEAISDLH
KVGQKLGKFEVEKRRAVELEDFDTAKKKKLQSDEYRVHVYKQLDIRDLLQ
IPKFEKDHVLQNITNVPKQPSTVQTLSPKIDSSITTNTKSEPEEVRLPPI
NTSSTINNINHHSLHHTSTTTARSPRQQVEENMSSVEAMPEINVSATYDI
DECLSQSQNKNDERPLPSLNNRKSQGVIEEQENENDTHNETGLRTLSLSF
LIMLYKGKDLSTYLNTRKNC

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_010448	XLOC_010448	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00018678	TCONS_00018678	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR008979	Galactose-bd-like

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 407..440
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 319..390
IPR008979	Galactose-binding domain-like	SUPERFAMILY	49785	Galactose-binding domain-like	coord: 4..149

Blast

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BLAST of TCONS_00018678-protein vs. Swiss-Prot (Human)
Match: CE104 (Centrosomal protein of 104 kDa OS=Homo sapiens GN=CEP104 PE=1 SV=1)

HSP 1 Score: 312.383 bits (799), Expect = 4.088e-97
Identity = 179/442 (40.50%), Postives = 265/442 (59.95%), Query Frame = 0

Query:    1 MPKKLPFEVIHVSGHDEGYSGKELEVHSPTTRGWQSLRFCEYPQEIIFSLKEQCKITKIQVLSHQHNIGSKIEFFIGESKEQSL---RSCSFSRLGYVQLAPNAEANYQARELKSVTLNKDGIFVKILVHRNHINKLNVYNQVGLVAVNILGYQLSKEFEGQHPQEKTEDVVNFYMNQVTSEDEVVNTSKLNASPRYEYGKEISPYDDLAFDMYQDSETAQLIRKLDEKKHQAIIEERYDYAKKLKEAISDLHKVGQKLGKFEVEKRRAVELEDFDTAKKKKLQSDEYRVHVYKQLDIRDLLQIPKFEKDHVLQNITNVPKQPSTVQTLSPKIDSSITTNTKSEPEEVRLPPINTSSTINNINHHSLHH--TSTTTARSPRQQ-VEENMSSVEAMPEINVSATYDIDECLSQSQNKNDERPLPSLNNRKSQGVIEEQENEND 436
            MP K+ F V+  SGH++G+S +EL +H+PT  GW+S RFC++PQEI+  + E+C+I K+Q+L+HQ+ I SKIEF+I ES  +     ++  F RLGYV L  N +   +ARELKSV ++  G F+K++ H+NH+NK N+YNQV LVA+NI+G     +F  +      E +++ Y+    SED  +  +    S   +Y   ISP DDLAFDMYQD E AQ+IRKLDE+K +A+ +ERYDYAKKLK+AI+DL KVG++LG++EVEKR AVE ED+D AK+KK Q ++YR  VY+QL++  LL         +++   ++P QP   ++ SP        + K  P    LP +    T N      L    +S +   SP+   V+  + + +  P+IN  +               DERPLP++     + V+E + +  D
Sbjct:    1 MPHKIGFVVVSSSGHEDGFSARELMIHAPTVSGWRSPRFCQFPQEIVLQMVERCRIRKLQLLAHQYMISSKIEFYISESLPEYFAPYQAERFRRLGYVSLCDNEKTGCKARELKSVYVDAVGQFLKLIFHQNHVNKYNIYNQVALVAINIIGD--PADFSDESNTASREKLIDHYLGH-NSEDPALEGTYARKS---DY---ISPLDDLAFDMYQDPEVAQIIRKLDERKREAVQKERYDYAKKLKQAIADLQKVGERLGRYEVEKRCAVEKEDYDLAKEKKQQMEQYRAEVYEQLELHSLLDA------ELMRRPFDLPLQP-LARSGSP-------CHQKPMPS---LPQLEERGTENQFAEPFLQEKPSSYSLTISPQHSAVDPLLPATDPHPKINAESL------------PYDERPLPAIRKHYGEAVVEPEMSNAD 404

The following BLAST results are available for this feature:

BLAST of TCONS_00018678-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00018678-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
CE104	4.088e-97	40.50	Centrosomal protein of 104 kDa OS=Homo sapiens GN=...	[more]

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TCONS_00018678-protein (polypeptide) - C. hemisphaerica