TCONS_00018637-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00018637-protein
Unique NameTCONS_00018637-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length327

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00018637-protein ID=TCONS_00018637-protein|Name=TCONS_00018637-protein|organism=Clytia hemisphaerica|type=polypeptide|length=327bp
MTATAMRRTRDFIIANLQMYQPKLYIRSPGKQNITYTLHTVNHKNVDKIF
QPLIEELRIHKYDCERVVIFSNRDNVVDIFGSFDYILREEYPMYETRPYA
MYHSTTEEPIKKHIVESFQDPNGTIRILMATIAFGMGIDCKNLHQVIHFG
PPADLDSYFQESGRAGRDGKQSVALLLRYPKSFIRNSSETIKEYXLHHVI
HFGPPADLDSYFQESGRAGRDGKQSVALLLRYPKSFIRNSSETIKEYCLL
EDQCRRQMLLKLYDSSEKIPEITPQHNCCDFCYQSCDCGDCHLPKHFIDV
DEIKPIIDVDEEVVVEEDTECFEKEDS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010417XLOC_010417Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00018637TCONS_00018637Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR011991WHTH_DNA-bd_dom
IPR027417P-loop_NTPase
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 323..327
NoneNo IPR availableGENE3D3.40.50.300coord: 31..194
e-value: 4.6E-24
score: 84.5
NoneNo IPR availableGENE3D3.40.50.300coord: 195..234
e-value: 1.1E-6
score: 27.8
NoneNo IPR availableCDDcd00079HELICccoord: 47..177
e-value: 4.55804E-22
score: 88.4488
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 85..169
e-value: 7.2E-14
score: 62.1
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 53..168
e-value: 1.9E-17
score: 63.5
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 45..208
score: 14.248
IPR011991Winged helix-turn-helix DNA-binding domainGENE3D1.10.10.10coord: 235..316
e-value: 6.3E-4
score: 19.1
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 40..182
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 197..272

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00018637-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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