TCONS_00018634-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00018634-protein
Unique NameTCONS_00018634-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1047

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00018634-protein ID=TCONS_00018634-protein|Name=TCONS_00018634-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1047bp
MDRQQASYATKPQGKNTIFARIKRKEEHDKIAKLLKPYCRLLVRWPMLIV
LPILLFVALSIVFSIIPGLGAKDYPNFSEPNKGFRPRVTEQAMKSIALDN
LQNKKWGDYQLTNSPGVSVPFGTGRKRKRRNAEKIIDFEENLSFHCYIVY
QGSGNLLTAQNMNDLCRLHNQYIKGYPNYNSYFKPQTHFLPSYIATLNNH
ENCTNLQDYEVNEFKRILERCVGYYKNGTLKQCIDDSTTCIYISNFCTQH
SNLTNPSSLVQLIYNTFYYLTDSDFADDLNNLQYTATVDIKVGNLSDPDT
GFFKPLYDDYLYEPSSLKVGDVEVVSYTMWNLKAILFEQAVFPQTFFIVG
AILLILLLIWFYSGSIFIGVMTFICALMAIIISYFIYGRIYDLDFFPFLN
VITLIFLCGITADDAFVYIGAWDEAQKIYLFSEYKNREECLIKWATHAIR
HALISMLVTSLTTAAAFYANLSSVITSVKCFGLFAGTSIIVNYLLIITLF
PAIVIIQEKYLNCGGTSPSSKKKEDKELHKFHKMLLKYSDKLFNDLLPKL
ILKGRFAFIIVFLGLGLVGCFTTFMNIQTPSSSDFQYFISSHVSESFELE
YKDKFDAGTSGASFQNVVFAFGIKPADNGYTLDPDDMGTIELYDEPLDLP
NVQVWLNQFCRNLRTASFIQESESCDNLEQFFNALTSRCLPGQSVCCDLE
LPLPNEDFMTCFNANIQRGQQSTEFDVTSPIFDSDGNLKTMLIFARTNFA
STNVFDYNEDATEQISDWFEEQYSNVTSPDFPGYQYLINSAFDLQQGLIQ
STKESLGVAIGVAFIAILFTTYNILLSLYSILTITLIISSTVGILVLSGW
KLNVLESIVFSVSAGLSADFTLHYSVAYQTSMNKWKRKERVRDALKHIGP
AILMGAVTTFIAGMVMTPSYVLAYLQMAQFLMLVTFMSWLFSTFFFVPLC
AAIGPIGNLGQLTPGKIERARTTIRKSVSHRHQSIRQRISGNRSTFKGNF
DKENQQGDSNDFSEVSVIKNGNVTANDNNNNENKIGKTVDAMTEENF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010415XLOC_010415Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00018634TCONS_00018634Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001036Acrflvin-R
IPR003392Ptc/Disp
IPR000731SSD
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006810 transport
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
molecular_function GO:0005215 transporter activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001036Acriflavin resistance proteinPRINTSPR00702ACRIFLAVINRPcoord: 481..504
score: 24.17
coord: 397..421
score: 27.4
coord: 340..363
score: 16.04
NoneNo IPR availableGENE3D1.20.1640.10coord: 311..511
e-value: 6.2E-19
score: 67.5
NoneNo IPR availableGENE3D1.20.1640.10coord: 741..955
e-value: 5.5E-29
score: 100.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 993..1012
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1022..1047
NoneNo IPR availableSUPERFAMILY82866Multidrug efflux transporter AcrB transmembrane domaincoord: 765..954
NoneNo IPR availableSUPERFAMILY82866Multidrug efflux transporter AcrB transmembrane domaincoord: 347..507
IPR003392Protein patched/dispatchedPFAMPF02460Patchedcoord: 366..512
e-value: 7.9E-8
score: 30.8
coord: 806..948
e-value: 6.0E-6
score: 24.6
IPR000731Sterol-sensing domainPROSITEPS50156SSDcoord: 396..506
score: 14.284

Blast
BLAST of TCONS_00018634-protein vs. Swiss-Prot (Human)
Match: DISP1 (Protein dispatched homolog 1 OS=Homo sapiens GN=DISP1 PE=1 SV=3)

HSP 1 Score: 438.343 bits (1126), Expect = 7.162e-133
Identity = 321/1087 (29.53%), Postives = 529/1087 (48.67%), Query Frame = 0
Query:   33 KLLKPYCRLLVRWPMLIVLPILLFVALSIVFSIIPGLGAKDYPNFSEPNKGFRPRVTEQAMKSIALDNLQNKKWGDYQLTNSPGVSVPFGTGRKRKRRNAEKIIDFEENL--------SFHC--------YIVYQGSG--NLLTAQNMNDLCRLHNQYIKGYPNYNSYFKPQTHF-------LPSYIATLNNHENCTNLQDYEVNEFKRILERCVGYYKNGTL-KQCID------DSTTCIYISNFCTQHSNLTNPSSLVQLIYNTFYYLTDSDFADDLNNLQYTATVDIKVGNLSDPDTGFFKPLYDDYLYEPSSLKVGD-VEVVSYTMWNLKAILFEQAVFPQTFFIVGAILLILLLIWFYSGSIFIGVMTFICALMAIIISYFIYGRIYDLDFFPFLNVITLIFLCGITADDAFVYIGAWDEAQKIYLFSEYKNREECLIKWATHAIRHALISMLVTSLTTAAAFYANLSSVITSVKCFGLFAGTSIIVNYLLIITLFPAIVIIQEKYL----NCGGTSPSSKKKEDKEL-----HKFHKMLLKYSDK---LFNDLLPKLILKGRFAFIIVFLGLGLVG----CFTTFMNIQTPSSSDFQYFISSHVSESFELEYKD--KFDAGTSGASFQ-NVVFAFGIKPADNGYTLDPDDMGTIELYDEPLDL--PNVQVWLNQFCRNLRTASFIQESESCDNLEQFFNAL-----TSRC-LPGQSVCCD-LELPLPNEDFMTCFNANIQRGQQSTEFDVTS----PIFDSDGNLKTMLIFARTNFASTNVFDYNEDATEQISDWFEEQYSNVTSPDFPGYQYLINSA--FDLQQGLIQSTKESLGVAIGVAFIAILFTTYNILLSLYSILTITLIISSTVGILVLSGWKLNVLESIVFSVSAGLSADFTLHYSVAYQTSMNKWKRKERVRDALKHIGPAILMGAVTTFIAGMVMTPSYVLAYLQMAQFLMLVTFMSWLFSTFFFVPLCAAIGPIGNLGQLT-PGKIERA--RTTIRKSVSHRHQSIRQRIS-------GNRSTFKGNF-DKENQQGDSNDFSEVSVIKNGNVTANDNNNNENKIGKTVDA 1041
            KL K Y  L+  WP++++    +F    IV   + G+   + P+FS+P  GF PR T    + +  +N+         L N P           R  R ++   + E+          SF C         +V+  SG   L     +  +C + N  I+ +P +    +  T         L +YIA LNN  +C  + + +V+   ++L  C  +Y+NGTL   C D      D   C  +   CT+++           +Y   +YL D DF        Y AT  +K   L  P T   + + + YL    +    D V  ++   + +K  LF+  +   T +   AI+++LL++  Y+ S+FI +MT    + ++I+SYF+Y  ++  +FFPF+N+  LI L GI ADDAFV    W+       ++++        +  +  ++HA +SM VTS TTAAAFYAN  S IT+++CFG++AGT+I+VNY+L++T  PA+V++ E+YL     C    P  +  ++K        K HK+L   S+     F  +LP +++K R+ ++  FL L + G    C    M + +   S+FQ F SSH  E ++ EYK    F+    G      +   +G+ P DNG  L+P   G + L D   ++  P  Q W+  FC+ LR  +F  +++  D    F            C  P    CC     P   E F  C    I   ++ST + + S    P FD +  ++ +++  ++ +  T  ++      +++  W   + S  ++P+     + +++   +DLQ  L   T  ++G+++ VAF  +L TT+NI++SLY+I++I   I  TVG LVL GW+LNVLES+  SV+ GLS DF +HY VAY+ + +   R+ +V  +L  +G A+ M A+TTF+AG +M PS VLAY Q+  F+ML+  +SW F+TFFF  +C  +GP G  GQ+  P K++ +     +  S S + QS    I+       G +S  +  F + E     S    E +  +  ++ +   N+    +G  V A
Sbjct:  176 KLPKSYAALIADWPVVVLGMCTMF----IVVCALVGVLVPELPDFSDPLLGFEPRGTAIGQRLVTWNNMVKNTGYKATLANYPFKYADEQAKSHRDDRWSDDHYEREKREVDWNFHKDSFFCDVPSDRYSRVVFTSSGGETLWNLPAIKSMCNVDNSRIRSHPQFGDLCQRTTAASCCPSWTLGNYIAILNNRSSCQKIVERDVSHTLKLLRTCAKHYQNGTLGPDCWDMAARRKDQLKCTNVPRKCTKYN----------AVYQILHYLVDKDFMTP-KTADY-ATPALKYSMLFSP-TEKGESMMNIYLDNFENWNSSDGVTTITGIEFGIKHSLFQDYLLMDTVYPAIAIVIVLLVMCVYTKSMFITLMTMFAIISSLIVSYFLYRVVFHFEFFPFMNLTALIILVGIGADDAFVLCDVWN-------YTKFDKPHAETSETVSITLQHAALSMFVTSFTTAAAFYANYVSNITAIRCFGVYAGTAILVNYVLMVTWLPAVVVLHERYLLNIFTCF-KKPQQQIYDNKSCWTVACQKCHKVLFAISEASRIFFEKVLPCIVIKFRYLWLFWFLALTVGGAYIVCINPKMKLPSLELSEFQVFRSSHPFERYDAEYKKLFMFERVHHGEELHMPITVIWGVSPEDNGNPLNPKSKGKLTL-DSSFNIASPASQAWILHFCQKLRNQTFFYQTDEQDFTSCFIETFKQWMENQDCDEPALYPCCSHWSFPYKQEIFELCIKRAIMELERSTGYHLDSKTPGPRFDINDTIRAVVLEFQSTYLFTLAYEKMHQFYKEVDSWISSELS--SAPEGLSNGWFVSNLEFYDLQDSLSDGTLIAMGLSVAVAFSVMLLTTWNIIISLYAIISIAGTIFVTVGSLVLLGWELNVLESVTISVAVGLSVDFAVHYGVAYRLAPDP-DREGKVIFSLSRVGSAMAMAALTTFVAGAMMMPSTVLAYTQLGTFMMLIMCISWAFATFFFQCMCRCLGPQGTCGQIPLPKKLQCSAFSHALSTSPSDKGQSKTHTINAYHLDPRGPKSELEHEFYELEPLASHSCTAPEKTTYEETHICSEFFNSQAKNLGMPVHA 1233          
The following BLAST results are available for this feature:
BLAST of TCONS_00018634-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DISP17.162e-13329.53Protein dispatched homolog 1 OS=Homo sapiens GN=DI... [more]
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