TCONS_00018632-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00018632-protein
Unique NameTCONS_00018632-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length609

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00018632-protein ID=TCONS_00018632-protein|Name=TCONS_00018632-protein|organism=Clytia hemisphaerica|type=polypeptide|length=609bp
MATALVDHHHRTLISKINHRITSNEKFFSLEFYPPRTPSGTFNLFEKCDR
FSKGQPLFCDVTCDKVKDERKSNHSVKVASTAQNITMCDTMVQLNAHDLV
EEKAIEVLSNAKDHGLSTVMVLMEGIEESESSGDFECSAELVRFIREVYE
DYFTICVAGYPNCIEYESFYEQSMEHLIEEVEAGADFIITQMVFDATDFF
KFVNKCRENSISVPILPGIFPIQSYGCITQVARHSRIKIPNKIMNVLKPI
KNNDASVLKYGIFLTVELCKYLLQNALCAGLHFYTLNRETATTEVLKRVG
LWREAKLEHRVLPWKSDSDSNEREGEEVRPIFWSCRPKSYEHRTSCWENF
PNGRWGDSSTAEFGSFKDYHLFFAKNNNFQEQKKMWGDQLTCLQDIFDVF
VAFISGKPNKNGVKVKQIPWSEEDLAPETSLLTDELLHLNQNGILTINSQ
PNVNCVPSTDKTFGWGNPGGYVFQKGYLEFFCSEEDAKNLLTVLKNHDTI
NYHLVKASGDENYTNCDDEEANVVTWGVFTGSLVIQPTVVDPVAFHYWKE
EAFELWIEQWGRLYGPSSKSRQMIQQIHDGFYLANLVDNDYPRGNRLFDV
VRTVIGMRK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010414XLOC_010414Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00018632TCONS_00018632Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029041FAD-linked_oxidoreductase-like
IPR003171Mehydrof_redctse
Vocabulary: Biological Process
TermDefinition
GO:0006555methionine metabolic process
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0004489methylenetetrahydrofolate reductase (NAD(P)H) activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006555 methionine metabolic process
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029041FAD-linked oxidoreductase-likeGENE3D3.20.20.220coord: 5..311
e-value: 6.6E-77
score: 258.1
IPR029041FAD-linked oxidoreductase-likeSUPERFAMILY51730FAD-linked oxidoreductasecoord: 15..302
IPR003171Methylenetetrahydrofolate reductasePFAMPF02219MTHFRcoord: 16..300
e-value: 4.8E-77
score: 259.0
IPR003171Methylenetetrahydrofolate reductaseCDDcd00537MTHFRcoord: 28..299
e-value: 4.13715E-64
score: 212.861

Blast
[Close]
BLAST of TCONS_00018632-protein vs. Swiss-Prot (Human)
Match: MTHR (Methylenetetrahydrofolate reductase OS=Homo sapiens GN=MTHFR PE=1 SV=3)

HSP 1 Score: 603.979 bits (1556), Expect = 0.000e+0
Identity = 304/611 (49.75%), Postives = 403/611 (65.96%), Query Frame = 0 
Query:    4 ALVDHHHRTLISKINHRITSNEKFFSLEFYPPRTPSGTFNLFEKCDRFSKGQPLFCDVTCDKVKD--ERKSNHSVKVASTAQNITMCDTMVQLNAHDLVEEKAIEVLSNAKDHGLSTVMVLME---GIEESESSGDFECSAELVRFIREVYEDYFTICVAGYPNCIEYESFYEQSMEHLIEEVEAGADFIITQMVFDATDFFKFVNKCRENSISVPILPGIFPIQSYGCITQVARHSRIKIPNKIMNVLKPIKNNDASVLKYGIFLTVELCKYLLQNALCAGLHFYTLNRETATTEVLKRVGLWREAKLEHRVLPWKSDSDSNEREGEEVRPIFWSCRPKSYEHRTSCWENFPNGRWGDSSTAEFGSFKDYHLFFAKNNNFQEQ-KKMWGDQLTCLQDIFDVFVAFISGKPNKNGVKVKQIPWSEEDLAPETSLLTDELLHLNQNGILTINSQPNVNCVPSTDKTFGWGNPGGYVFQKGYLEFFCSEEDAKNLLTVLKNHD-TINYHLVKASGDENYTNCDDEEANVVTWGVFTGSLVIQPTVVDPVAFHYWKEEAFELWIEQWGRLYGPSSKSRQMIQQIHDGFYLANLVDNDYPRGNRLFDVVRTVIGM 607
             L    H  L  K+  R+ S +K+FSLEF+PPRT  G  NL  + DR + G PL+ DVT     D    K   S+ +ASTA N    +T++ +       E+    L  AK  GL  +M L     G +  E  G F  + +LV+ IR  + DYF ICVAGYP        +E  ++HL E+V AGADFIITQ+ F+A  FF+FV  C +  I+ PI+PGIFPIQ Y  + Q+ + S++++P +I +V++PIK+NDA++  YGI L V LC+ LL + L  GLHFYTLNRE ATTEVLKR+G+W E     R LPW   +    RE E+VRPIFW+ RPKSY +RT  W+ FPNGRWG+SS+  FG  KDY+LF+ K+ + +E+  KMWG++LT  + +F+VFV ++SG+PN+NG KV  +PW++E LA ETSLL +ELL +N+ GILTINSQPN+N  PS+D   GWG  GGYVFQK YLEFF S E A+ LL VLK ++  +NYHLV   G EN TN  + + N VTWG+F G  +IQPTVVDPV+F +WK+EAF LWIE+WG+LY   S SR +IQ IHD ++L NLVDND+P  N L+ VV   + +
Sbjct:   36 GLDPERHERLREKMRRRLESGDKWFSLEFFPPRTAEGAVNLISRFDRMAAGGPLYIDVTWHPAGDPGSDKETSSMMIASTAVNYCGLETILHMTCCRQRLEEITGHLHKAKQLGLKNIMALRGDPIGDQWEEEEGGFNYAVDLVKHIRSEFGDYFDICVAGYPKGHPEAGSFEADLKHLKEKVSAGADFIITQLFFEADTFFRFVKACTDMGITCPIVPGIFPIQGYHSLRQLVKLSKLEVPQEIKDVIEPIKDNDAAIRNYGIELAVSLCQELLASGLVPGLHFYTLNREMATTEVLKRLGMWTEDP--RRPLPWALSAHPKRRE-EDVRPIFWASRPKSYIYRTQEWDEFPNGRWGNSSSPAFGELKDYYLFYLKSKSPKEELLKMWGEELTSEESVFEVFVLYLSGEPNRNGHKVTCLPWNDEPLAAETSLLKEELLRVNRQGILTINSQPNINGKPSSDPIVGWGPSGGYVFQKAYLEFFTSRETAEALLQVLKKYELRVNYHLVNVKG-ENITNAPELQPNAVTWGIFPGREIIQPTVVDPVSFMFWKDEAFALWIERWGKLYEEESPSRTIIQYIHDNYFLVNLVDNDFPLDNCLWQVVEDTLEL 642
The following BLAST results are available for this feature:
BLAST of TCONS_00018632-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MTHR0.000e+049.75Methylenetetrahydrofolate reductase OS=Homo sapien... [more]
back to top