TCONS_00018623-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00018623-protein
Unique NameTCONS_00018623-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length367

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00018623-protein ID=TCONS_00018623-protein|Name=TCONS_00018623-protein|organism=Clytia hemisphaerica|type=polypeptide|length=367bp
MTTQHYKGLDQTKLDKYMKLPQKNAVQVLYVWIDGTGEHMRCKTKTMWNR
EDVELKDLPVWNFDGSSTGQAEGHNSDVYLHPVALFPDPFRGLPNKIALC
ETYTHDHKPTKSNKRRSCLTVMENPKVKESKPWFGLEQEYTLLDADNYPL
GWPKQGYPGPQGPYYCSVGTGRVFGREVMEAHYRCCMYAGVTISGENAEV
MPAQWEYQVGPCEGIEMGDHLWMARYFMERVCEDFGVIVTLDPKPIPGEW
NGAGCHANFSTEAMRVDGGINEINKAIERLSKRHDWHIQQYDPSGGADNA
RRLTGKCETASIHEFSYGVASRNTSIRIPRQIAEDGKGYLEDRRPSSNCD
PYSVTEAIVRTSVLLEE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010412XLOC_010412Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00018623TCONS_00018623Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008146Gln_synth_cat_dom
IPR008147Gln_synt_b-grasp
IPR014746Gln_synth/guanido_kin_cat_dom
IPR027302Gln_synth_N_conserv_site
IPR027303Gln_synth_gly_rich_site
Vocabulary: Molecular Function
TermDefinition
GO:0004356glutamate-ammonia ligase activity
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0006807nitrogen compound metabolic process
GO:0006542glutamine biosynthetic process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006542 glutamine biosynthetic process
biological_process GO:0006807 nitrogen compound metabolic process
molecular_function GO:0003824 catalytic activity
molecular_function GO:0004356 glutamate-ammonia ligase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008146Glutamine synthetase, catalytic domainSMARTSM01230Gln_synt_C_2coord: 111..362
e-value: 2.1E-57
score: 206.7
IPR008146Glutamine synthetase, catalytic domainPFAMPF00120Gln-synt_Ccoord: 123..260
e-value: 5.3E-12
score: 45.3
IPR008147Glutamine synthetase, beta-Grasp domainPFAMPF03951Gln-synt_Ncoord: 27..104
e-value: 3.1E-13
score: 49.2
IPR008147Glutamine synthetase, beta-Grasp domainSUPERFAMILY54368Glutamine synthetase, N-terminal domaincoord: 15..110
IPR014746Glutamine synthetase/guanido kinase, catalytic domainGENE3D3.30.590.10coord: 96..364
e-value: 8.3E-71
score: 238.3
IPR027302Glutamine synthetase, N-terminal conserved sitePROSITEPS00180GLNA_1coord: 63..80
IPR027303Glutamine synthetase, glycine-rich sitePROSITEPS00181GLNA_ATPcoord: 244..260
NoneNo IPR availableSUPERFAMILY55931Glutamine synthetase/guanido kinasecoord: 113..362

Blast
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BLAST of TCONS_00018623-protein vs. Swiss-Prot (Human)
Match: GLNA (Glutamine synthetase OS=Homo sapiens GN=GLUL PE=1 SV=4)

HSP 1 Score: 492.656 bits (1267), Expect = 1.446e-175
Identity = 222/366 (60.66%), Postives = 282/366 (77.05%), Query Frame = 0 
Query:    1 MTTQHYKGLDQTKLDKYMKLPQKNAVQVLYVWIDGTGEHMRCKTKTMWNREDVELKDLPVWNFDGSSTGQAEGHNSDVYLHPVALFPDPFRGLPNKIALCETYTHDHKPTKSNKRRSCLTVMENPKVKESKPWFGLEQEYTLLDADNYPLGWPKQGYPGPQGPYYCSVGTGRVFGREVMEAHYRCCMYAGVTISGENAEVMPAQWEYQVGPCEGIEMGDHLWMARYFMERVCEDFGVIVTLDPKPIPGEWNGAGCHANFSTEAMRVDGGINEINKAIERLSKRHDWHIQQYDPSGGADNARRLTGKCETASIHEFSYGVASRNTSIRIPRQIAEDGKGYLEDRRPSSNCDPYSVTEAIVRTSVLLE 366
            MTT     L++     YM LPQ   VQ +Y+WIDGTGE +RCKT+T+ + E   +++LP WNFDGSST Q+EG NSD+YL P A+F DPFR  PNK+ LCE + ++ +P ++N R +C  +M+   V    PWFG+EQEYTL+  D +P GWP  G+PGPQGPYYC VG  R +GR+++EAHYR C+YAGV I+G NAEVMPAQWE+Q+GPCEGI MGDHLW+AR+ + RVCEDFGVI T DPKPIPG WNGAGCH NFST+AMR + G+  I +AIE+LSKRH +HI+ YDP GG DNARRLTG  ET++I++FS GVA+R+ SIRIPR + ++ KGY EDRRPS+NCDP+SVTEA++RT +L E
Sbjct:    1 MTTSASSHLNKGIKQVYMSLPQGEKVQAMYIWIDGTGEGLRCKTRTL-DSEPKCVEELPEWNFDGSSTLQSEGSNSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYNRRPAETNLRHTCKRIMD--MVSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADRAYGRDIVEAHYRACLYAGVKIAGTNAEVMPAQWEFQIGPCEGISMGDHLWVARFILHRVCEDFGVIATFDPKPIPGNWNGAGCHTNFSTKAMREENGLKYIEEAIEKLSKRHQYHIRAYDPKGGLDNARRLTGFHETSNINDFSAGVANRSASIRIPRTVGQEKKGYFEDRRPSANCDPFSVTEALIRTCLLNE 363
The following BLAST results are available for this feature:
BLAST of TCONS_00018623-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GLNA1.446e-17560.66Glutamine synthetase OS=Homo sapiens GN=GLUL PE=1 ... [more]
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