TCONS_00018617-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00018617-protein
Unique NameTCONS_00018617-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length788

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00018617-protein ID=TCONS_00018617-protein|Name=TCONS_00018617-protein|organism=Clytia hemisphaerica|type=polypeptide|length=788bp
MKNAGNSDDYGKKFQLTDSLLKRVLSREDYDRIKTIEPVFVYTDELNCKP
LKNPGYKHAAVSSNFLYIVNTPAKNDSDMLFVVSLENVENIEIIFDTADF
LQGNLRKTSQHIKLRCKQQLLNTEHLLFKAASLALAPSASRETLRTDGTL
KPTKLTTSKSSSNLSLDNENYGGPVSPRICKSLNTSPTSSFSNTDLNSRL
DSDFKDSNDDISKQKSARRPLPKPMFGTEMLNASFTSTELHGLKSSKKQK
ASEMSPSRSLESLDIQSALLKRKPLTKSQKDYFLSSSLNQSWNDILRNEQ
GSTTSTKLKNPNLDTLRRSDLNESSIHGDTKKSLNQSQQSLNGSLSSKIF
KSMKGQNTKPRNPNLDSLRMSEPAKSSSNESLKSKKDSQLQSSLSSRLFK
SSKAGSMPTIHKHPTDQPKKTTGSNYNIPHSYSEGPSNVEKPRPSLSHYE
VHVFTVAPGSKMFNVIEQAWIYSIITKTCNMKDTSIGILSASQLSQHRKH
ETDQLTQKFTELKREILNTASYDELFLLTKELKFAADKYSVIRRSTWKSP
ALLGFYVNKMRILVESKCTSVTERMDELDAAILFGEFLVSIFQDSEMFNG
RNMILNENSASFVKELLNVILTVPKMKCFSRDKESSTNDELLDLITNWTE
TSISILFEVITATKQNVWCCSLGMKSLDVNLLSRFLIDEERHLKTLMDHL
VLKLTSSLTEEWEIPPSPFSIVVLYKSLVVLHYVCTHCPCIMDYVKTYYH
EEVKYYISKEDNVKRIPSNYPVTCLIKSYLPKVIEAIT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010409XLOC_010409Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00018617TCONS_00018617Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027878DUF4551
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027878Protein of unknown function DUF4551PFAMPF15087DUF4551coord: 14..273
e-value: 5.0E-22
score: 78.4
coord: 271..773
e-value: 5.2E-46
score: 157.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 141..227
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 302..444
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 240..259

Blast
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BLAST of TCONS_00018617-protein vs. Swiss-Prot (Human)
Match: CL056 (Uncharacterized protein C12orf56 OS=Homo sapiens GN=C12orf56 PE=2 SV=3)

HSP 1 Score: 100.523 bits (249), Expect = 7.190e-22
Identity = 93/359 (25.91%), Postives = 175/359 (48.75%), Query Frame = 0 
Query:  433 SEGPSNVEKPRPSLSHYEVHVFTVAPGSKMFNVIEQAWIYSIITKTCNMKDTSIGILSASQLSQHRKHETDQLTQKFTELKREI-LNTASYDELFLLTKELKFAADKYSVIRRSTWKSPALLGFYVNKMR-ILVESK----CTSVTERMDELDAAILFGEFLVSIFQDSEMFNGR-NMILNENSASFVKELLNVILTVPKM--KCFSRDKE---------SSTNDELLDLITNWTETSISILFEVITATKQNVWCCSLGMKSLDVNLLSRFLIDEERHLKTLMDHLVLKLTSSLTEEWEIPPSPFSIVVLYKSLVVLHYVCTHCPCIMDYVKTYYHEEVKYYISKEDNVKRIPSNYPVT 773
            S+  SN+EK        E+H++ ++  S +F  ++ +W   II  T  ++D       +  +   + + +++  + F++LK E+ L   S   +  L  ELK AA K  +++R  WK+  L  F VNK+   L ES+      + ++R+DEL A I   + LV +F+++E  + R N +  +  A F   LL ++++ P++   C   D +          S + EL  LI  +T T+ ++L+E++   +Q      LG     ++ +  FL      + T +  +V ++   L+  +++  SP   V+LY+   +L     H   + +Y++  Y EE +Y+I      KR+P  YP+T
Sbjct:  261 SQSNSNLEK-----KESELHLYVISTTSSIFLHLKSSWNNYIIKATL-LQDPFYASEFSPAIGSQKPYRSEEKIKHFSQLKSELFLKDNSLRRILSLLMELKVAAQKNFILKRLFWKTSDLFYFIVNKLHEYLPESRDKNALQNQSQRVDELVACIEIIQTLVLMFRETETESSRLNTLAAKKGALF--NLLVILISEPQIPKSCPVFDIQLVADSALVRMSFDAELQKLILEYTNTATALLYEILLVFQQG--NLGLGSTKFAISWIMSFL-QSCPPIITFVASIVKQVVRGLSASFQLL-SPCQAVLLYQQFYILKSCLRHSRTLAEYIRNNYREEFRYFIHMPALQKRLPLCYPIT 607
The following BLAST results are available for this feature:
BLAST of TCONS_00018617-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CL0567.190e-2225.91Uncharacterized protein C12orf56 OS=Homo sapiens G... [more]
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