TCONS_00018599-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00018599-protein
Unique NameTCONS_00018599-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length605

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00018599-protein ID=TCONS_00018599-protein|Name=TCONS_00018599-protein|organism=Clytia hemisphaerica|type=polypeptide|length=605bp
RNQFFCLLFILDLQTEINKLPRVRQLSESTVERLITEPSQTDASWKHAKQ
AYRCPLCAKVFPFKSKLQRHVLVHTGIKPYKCTVCGRGFTQQIDLQRHLT
RHTGEKPFKCHLCKAQFIRADNLRKHCKDAHYVSIEEPIRKRRRKTTGSD
TVLPPLEVAIALALSETERNGGRVLGRATTRTSTRTTASSNTKPRYAQGD
GSIPKAPPSRGAPDERHPPGSMYPPRMSSRGEGGQPPSGYPPNYPPHLGP
RHQQNVRYPFHHDARTHGAAYPPPPHHPPQQRRQHSPPAEFHHPSSPSSY
HRNRDRRYMHLDSPSSSRYYHHEGPPPPPGARGYYSHHEDRYHEKEERDP
RDRLPSSTASKEKYQDYHSVSLEQSQSQSSGGYPPHKRSLPPDHPNRLPH
AEDSEYSHEGRKEDDYSRLPSSQDKLAPYRMSSSQIQQHSPVDYIQPRER
EEESAYRGGEDRDRPRNPYSAPPRSEEDHRALFRGKPSISYGDYGTTSKT
SSRPSSDVSMVPQNREYNRSIPPPEATSPYQPPQPRSSTTSSEPGDFASM
VDKDALIEPRPSSSPPPPPQATEDINEDNVYSDEIPIVTPSDDNTLTVPQ
SAVSS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010402XLOC_010402Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00018599TCONS_00018599Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 108..131
e-value: 0.047
score: 22.8
coord: 80..102
e-value: 1.2E-4
score: 31.5
coord: 52..74
e-value: 7.9E-4
score: 28.7
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 82..102
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 110..131
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 54..74
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 52..79
score: 14.233
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 80..107
score: 16.165
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 108..131
score: 9.473
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 74..126
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 50..83
NoneNo IPR availableGENE3D3.30.160.60coord: 86..98
e-value: 4.7E-12
score: 45.3
NoneNo IPR availableGENE3D3.30.160.60coord: 99..118
e-value: 1.7E-10
score: 40.2
NoneNo IPR availableGENE3D3.30.160.60coord: 30..64
e-value: 5.8E-6
score: 25.8
NoneNo IPR availableGENE3D3.30.160.60coord: 119..267
e-value: 6.8E-4
score: 19.1
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 80..102
e-value: 3.4E-5
score: 24.0
coord: 52..74
e-value: 6.3E-4
score: 20.0
NoneNo IPR availableGENE3D3.30.160.60coord: 65..85
e-value: 2.6E-16
score: 59.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 171..605

Blast
[Close]
BLAST of TCONS_00018599-protein vs. Swiss-Prot (Human)
Match: ZBT26 (Zinc finger and BTB domain-containing protein 26 OS=Homo sapiens GN=ZBTB26 PE=1 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 5.279e-19
Identity = 38/82 (46.34%), Postives = 50/82 (60.98%), Query Frame = 0 
Query:   50 QAYRCPLCAKVFPFKSKLQRHVLVHTGIKPYKCTVCGRGFTQQIDLQRHLTRHTGEKPFKCHLCKAQFIRADNLRKHCKDAH 131
            + + C LC K F  K  L RH+ VH GIKP++C +CG+ F+Q+  LQ HL  H+G+KP KC+ C   F     LRKH K  H
Sbjct:  296 KLFMCLLCGKTFTQKGNLHRHMRVHAGIKPFQCKICGKTFSQKCSLQDHLNLHSGDKPHKCNYCDMVFAHKPVLRKHLKQLH 377
The following BLAST results are available for this feature:
BLAST of TCONS_00018599-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZBT265.279e-1946.34Zinc finger and BTB domain-containing protein 26 O... [more]
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