TCONS_00018440-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00018440-protein
Unique Name	TCONS_00018440-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	316

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00018440-protein ID=TCONS_00018440-protein|Name=TCONS_00018440-protein|organism=Clytia hemisphaerica|type=polypeptide|length=316bp
DRCFSRPIRCLLLFTKKIFNITINITINMMRLKESSLETKEPHHIPGYCG
YMPQFKYKISETFGKTTHDLLTAPEISRSNGPVLTPLKNKDSARKERHAA
NKGLICSRNKQCGGDQKYGLNMVPGYTGYIPKGQHYFGDRYAIFTDEAIS
HMEKDQQTYVDQQSGLRSLIKEQCVENGQRKLPLTARTKKTKMYFPKGIQ
HSLSPYTYNNDDPRKYMLSGYTGFVPKSRETIGMGYPDITKRALCDFTTK
SLEAKALEKTPVVIRRAQKKQIDTKPIYIHDSGMVPHYTGHVPGEKFRFG
RTFGYSTTNAVNKTKI

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_010343	XLOC_010343	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00018440	TCONS_00018440	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR018902	UPF0573/UPF0605

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018902	Uncharacterised protein family UPF0573/UPF0605	PFAM	PF10629	DUF2475	coord: 283..308 e-value: 1.3E-4 score: 22.0 coord: 41..73 e-value: 6.9E-11 score: 42.1

Blast

[Close]

BLAST of TCONS_00018440-protein vs. Swiss-Prot (Human)
Match: F166B (Protein FAM166B OS=Homo sapiens GN=FAM166B PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 3.636e-34
Identity = 85/291 (29.21%), Postives = 144/291 (49.48%), Query Frame = 0

Query:   37 LETKEPHHIPGYCGYMPQFKYKISETFGKTTHDLL------TAPEISRSNGPVLTPLKNKDSARKERHAANKGLICSRNKQCGGDQKYGLNMVPGYTGYIPKGQHYFGDRYAIFTDEAISHMEKDQQTYVDQQSGLRSLIKEQCVENGQRKLPLTARTKKTKMYFPKG--------IQHSLSPYTYNNDDPRKYMLSGYTGFVPKSRETIGMGYPDITKRALCDFTTKSLEAKALEKTPVVIRRAQKKQIDTKP-IYIHDSGMVPHYTGHVPGEKFRFGRTFGYSTTNAVN 312
            L  + PH+IPGY G+ P  ++ + +T+G+ T  LL        P + R+  P + P ++ +  R+        L   R     G ++   +M+PGYTG++P+ Q  F    +    EA+S       T++ ++ G   L KE     G++       T+K ++  P+G        +    SPY+ ++ DPRK+ +SG+TG+VP +R   G  +P +T +AL +F  K     A +           K +   P  Y  + G++P+Y G+VPG KF+FG TFG+ T +A+ 
Sbjct:   11 LNPQNPHYIPGYTGHCPLLRFSVGQTYGQVTGQLLRGPPGLAWPPVHRTLLPPIRPPRSPEVPRES-------LPVRR-----GQERLSSSMIPGYTGFVPRAQFIFAKNCSQVWAEALSDF-----THLHEKQGSEELPKE---AKGRKD------TEKDQVPEPEGQLEEPTLEVVEQASPYSMDDRDPRKFFMSGFTGYVPCARFLFGSSFPVLTNQALQEFGQKHSPGSAQD----------PKHLPPLPRTYPQNLGLLPNYGGYVPGYKFQFGHTFGHLTHDALG 265

The following BLAST results are available for this feature:

BLAST of TCONS_00018440-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00018440-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
F166B	3.636e-34	29.21	Protein FAM166B OS=Homo sapiens GN=FAM166B PE=2 SV...	[more]

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TCONS_00018440-protein (polypeptide) - C. hemisphaerica