TCONS_00018435-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00018435-protein
Unique NameTCONS_00018435-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length212

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00018435-protein ID=TCONS_00018435-protein|Name=TCONS_00018435-protein|organism=Clytia hemisphaerica|type=polypeptide|length=212bp
MKKQCQDKCDGRVWACVGVMGMKNSKQKKKAKAVIEHLKETTYFSEKELT
RWYKGFLKDCPSGKLGKEEFHKIYKQFFPYGNPENFSSFVFGVFDQNHDG
CIEFDEFIKALSITSRGSMEEKLRWAFRLYDQDEDGYITKEEMLSIVQSI
YVMVDRMANFPVDENTPEKRVEKIFSTMDKNSDGVLSIDEFINGCKADPS
VIQALSIYDGVM
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010341XLOC_010341Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00018435TCONS_00018435Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00450RECOVERINcoord: 90..111
score: 59.79
coord: 114..133
score: 65.0
coord: 186..206
score: 45.05
coord: 44..63
score: 69.62
coord: 160..175
score: 65.87
coord: 30..44
score: 34.1
coord: 136..154
score: 59.92
NoneNo IPR availableGENE3D1.10.238.110coord: 21..122
e-value: 3.9E-32
score: 110.6
NoneNo IPR availableGENE3D1.10.238.10coord: 123..211
e-value: 3.4E-24
score: 84.0
IPR002048EF-hand domainSMARTSM00054efh_1coord: 86..114
e-value: 1.1
score: 17.5
coord: 170..198
e-value: 0.0018
score: 27.5
coord: 122..150
e-value: 1.8E-6
score: 37.5
IPR002048EF-hand domainPFAMPF13405EF-hand_6coord: 90..112
e-value: 3.4E-5
score: 23.4
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 120..194
e-value: 1.9E-17
score: 63.4
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 62..80
score: 5.392
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 118..153
score: 14.625
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 166..201
score: 12.589
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 82..117
score: 11.054
IPR002048EF-hand domainCDDcd00051EFhcoord: 122..194
e-value: 1.81687E-14
score: 64.1061
IPR002048EF-hand domainCDDcd00051EFhcoord: 89..148
e-value: 1.37106E-13
score: 61.4097
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 179..191
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 131..143
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 95..107
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 26..209

Blast
[Close]
BLAST of TCONS_00018435-protein vs. Swiss-Prot (Human)
Match: NCS1 (Neuronal calcium sensor 1 OS=Homo sapiens GN=NCS1 PE=1 SV=2)

HSP 1 Score: 258.455 bits (659), Expect = 1.830e-88
Identity = 119/193 (61.66%), Postives = 151/193 (78.24%), Query Frame = 0 
Query:   20 MGMKNSKQKKKAKAVIEHLKETTYFSEKELTRWYKGFLKDCPSGKLGKEEFHKIYKQFFPYGNPENFSSFVFGVFDQNHDGCIEFDEFIKALSITSRGSMEEKLRWAFRLYDQDEDGYITKEEMLSIVQSIYVMVDRMANFPVDENTPEKRVEKIFSTMDKNSDGVLSIDEFINGCKADPSVIQALSIYDGVM 212
            MG  NSK K +   V+E L   TYF+EKE+ +WYKGF+KDCPSG+L    F KIYKQFFP+G+P  F++FVF VFD+N DG IEF EFI+ALS+TSRG+++EKLRWAF+LYD D DGYIT+ EML IV +IY MV      P +ENTPEKRV++IF+ MDKN+DG L++ EF  G KADPS++QALS+YDG++
Sbjct:    1 MGKSNSKLKPE---VVEELTRKTYFTEKEVQQWYKGFIKDCPSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSKADPSIVQALSLYDGLV 190
The following BLAST results are available for this feature:
BLAST of TCONS_00018435-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NCS11.830e-8861.66Neuronal calcium sensor 1 OS=Homo sapiens GN=NCS1 ... [more]
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