TCONS_00018434-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00018434-protein
Unique NameTCONS_00018434-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length166

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00018434-protein ID=TCONS_00018434-protein|Name=TCONS_00018434-protein|organism=Clytia hemisphaerica|type=polypeptide|length=166bp
FKIMIKITKSLKRFGLLLGTGINVFCVGHCIFTYGAELTFLSGPSMLPTF
NKYGDADVVITEKISKRSTASIKVGDIVISKSPTSPTNLVCKRVAATAGD
HVRSSPEMLTHGCPKLFEVPRGHIWLLGDNPENSTDSRSYGAVPIGLIHG
KVCFKVWPIPDFGFVS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010340XLOC_010340Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00018434TCONS_00018434Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000223Pept_S26A_signal_pept_1
IPR015927Peptidase_S24_S26A/B/C
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
Vocabulary: Molecular Function
TermDefinition
GO:0008236serine-type peptidase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
cellular_component GO:0016020 membrane
molecular_function GO:0008236 serine-type peptidase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000223Peptidase S26A, signal peptidase IPRINTSPR00727LEADERPTASEcoord: 34..50
score: 29.27
coord: 119..138
score: 52.62
coord: 90..102
score: 41.76
IPR000223Peptidase S26A, signal peptidase ITIGRFAMTIGR02227TIGR02227coord: 117..159
e-value: 1.9E-13
score: 48.6
IPR015927Peptidase S24/S26A/S26B/S26CPFAMPF00717Peptidase_S24coord: 43..103
e-value: 7.4E-6
score: 25.7
IPR015927Peptidase S24/S26A/S26B/S26CSUPERFAMILY51306LexA/Signal peptidasecoord: 34..165
NoneNo IPR availableGENE3D2.10.109.10coord: 30..165
e-value: 2.6E-29
score: 101.5
NoneNo IPR availableCDDcd06530S26_SPase_Icoord: 37..152
e-value: 2.47579E-23
score: 88.0263

Blast
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BLAST of TCONS_00018434-protein vs. Swiss-Prot (Human)
Match: IMP1L (Mitochondrial inner membrane protease subunit 1 OS=Homo sapiens GN=IMMP1L PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 5.606e-39
Identity = 69/153 (45.10%), Postives = 92/153 (60.13%), Query Frame = 0 
Query:   17 LLGTGINVFCVGHCIFTYGAELTFLSGPSMLPTFNKYGDADVVITEKISKRSTASIKVGDIVISKSPTSPTNLVCKRVAATAGDHVRSSPEMLTHGCPKLFE----VPRGHIWLLGDNPENSTDSRSYGAVPIGLIHGKVCFKVWPIPDFGFV 165
            L+G  I   C+ HC F Y   +   SGPSM PT     ++D+V  E +S R    I+ GDIVI+KSP+ P + +CKRV    GD      ++LT      F+    VP GH+WL GDN +NSTDSR YG +P GLI G++ FK+WP+ DFGF+
Sbjct:   12 LVGYTIQYGCIAHCAFEYVGGVVMCSGPSMEPTIQ---NSDIVFAENLS-RHFYGIQRGDIVIAKSPSDPKSNICKRVIGLEGD------KILTTSPSDFFKSHSYVPMGHVWLEGDNLQNSTDSRCYGPIPYGLIRGRIFFKIWPLSDFGFL 154
The following BLAST results are available for this feature:
BLAST of TCONS_00018434-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
IMP1L5.606e-3945.10Mitochondrial inner membrane protease subunit 1 OS... [more]
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