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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00018428-protein ID=TCONS_00018428-protein|Name=TCONS_00018428-protein|organism=Clytia hemisphaerica|type=polypeptide|length=636bp
MTVCSIFYFRSNFARFLDQSEKDKTLTPSRIPKPELSPKGKSRAKQRSQS
ANDQPEERPLSRGGTLREQENIISDLKKECFGLKMRIYYMEEQLHDAFAG
DTEGTIKQNIELKVTIEEIRTDLKEKSNLLTQASQALGQLSVEKEQDIKE
SNEKHDLEKKQTLDECNLKLNTKDKEIRRLEDELDELKNNLDSVDGNTEK
KDQIIDDKEREIQALTKELKAKDARFEKLQKAKQENDERLNAEVEELKAS
LESKEVNLKILKRDVDKMAASPERSNQHYKKLYEDQGREILVKTKQLNDI
TKDFEKKTNLVEGLKDHINGMEKSMKVMRSNLHEKEMDKQRVVSQLQEKL
KNYQSLLNQKDEENSEKSESLESMKETIAKSNQERLQFQLQSSQEKDSQM
IELNVKVKQQQFEIEKLKYLLEEKDKEVLYFGNKNLQLEEESTRERNEQL
QSLELLKQDVKEKVARLQAALDGSQKSYQSLQGRFNQMMDEKDKTIESVT
GALKFKDALIKELLATPSGLNEDQEAITKKLQSSFQMLQKRSEDQELKYL
DQMQNKDNDILDLTNQIQQATLTTQKSQAFVYNLQSKIKGLNANADEDNE
ILDKLRNSLKNAIDKERASRQDLVEMLNEKEEEISK Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR012943 | Cnn_1N |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005815 | microtubule organizing center |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| cellular_component |
GO:0005815 |
microtubule organizing center |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 407..427 |
| None | No IPR available | COILS | Coil | Coil | coord: 588..636 |
| None | No IPR available | COILS | Coil | Coil | coord: 433..477 |
| None | No IPR available | COILS | Coil | Coil | coord: 343..391 |
| None | No IPR available | COILS | Coil | Coil | coord: 553..573 |
| None | No IPR available | COILS | Coil | Coil | coord: 163..271 |
| None | No IPR available | COILS | Coil | Coil | coord: 116..136 |
| None | No IPR available | GENE3D | 1.20.120.330 | | coord: 146..287
e-value: 5.2E-6
score: 25.7 |
| None | No IPR available | GENE3D | 1.20.5.50 | | coord: 292..398
e-value: 0.0043
score: 16.2
coord: 431..549
e-value: 0.23
score: 10.6 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 21..67 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 354..376 |
| IPR012943 | Centrosomin, N-terminal motif 1 | PFAM | PF07989 | Cnn_1N | coord: 65..136
e-value: 3.1E-22
score: 78.4 |
Blast
The following BLAST results are available for this feature:
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