TCONS_00018396-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00018396-protein
Unique NameTCONS_00018396-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length530

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00018396-protein ID=TCONS_00018396-protein|Name=TCONS_00018396-protein|organism=Clytia hemisphaerica|type=polypeptide|length=530bp
MIGIKLQRLTPFSRQVSQFTKKYLHLNHRSNSKLVESYDHVVSEHKLIGK
TIGQVFIETVEKFPDHEAVVFHRDKKRMTFAQLDEKVNKLAASIIGLGLQ
KGDRVGIWGQNHLEWMITFLASVKAGTILVNVNPAYQSNELEYALNKVGM
KALFMTPEFKTSNYYDILQNVTPEILHSHPGELKSKKIPTLESVILTDGP
AMSGAFSFEDALAIGGKEEKLKVEQLQKGIQFDDPVNIQFTSGTTGNPKG
ATLTHHNLVNNAAAIAFGLDFTPVDRVCIPVPLYHCFGMVLGSMACLMTG
AAQVFPQRGFNAEATLDAIQTESCTAIYGTPAMFIDMLNHPSFPNINFGS
MRTGIMAGSPCPIEIMKKVISDMNCPEMTIAYGLTETSPATNLTSRDTPV
ELRVSSIGRVIPHVETKIIDEEGHIVPVNTSGELCFRGHCVFPGYWDDVI
KTKEAIDENGWFHSGDLGQIDENGYCKVVGRLKDMIIRGGENIYPTEVEN
FLHNHPDIEDVQIVGIPDERFGEECCAWIK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010316XLOC_010316Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00018396TCONS_00018396Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000873AMP-dep_Synth/Lig
IPR020845AMP-binding_CS
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
molecular_function GO:0003824 catalytic activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.300.30coord: 481..530
e-value: 1.7E-14
score: 53.9
NoneNo IPR availableGENE3D3.40.50.980coord: 48..243
e-value: 5.4E-42
score: 142.8
NoneNo IPR availableGENE3D3.40.50.980coord: 244..397
e-value: 7.1E-51
score: 171.6
NoneNo IPR availableGENE3D2.30.38.10coord: 398..480
e-value: 7.2E-26
score: 89.6
NoneNo IPR availableCDDcd05917FACL_like_2coord: 233..530
e-value: 3.51559E-168
score: 482.021
NoneNo IPR availableSUPERFAMILY56801Acetyl-CoA synthetase-likecoord: 45..529
IPR000873AMP-dependent synthetase/ligasePFAMPF00501AMP-bindingcoord: 58..488
e-value: 1.6E-107
score: 359.6
IPR020845AMP-binding, conserved sitePROSITEPS00455AMP_BINDINGcoord: 238..249

Blast
[Close]
BLAST of TCONS_00018396-protein vs. Swiss-Prot (Human)
Match: ACSF2 (Acyl-CoA synthetase family member 2, mitochondrial OS=Homo sapiens GN=ACSF2 PE=1 SV=2)

HSP 1 Score: 489.96 bits (1260), Expect = 2.615e-168
Identity = 233/502 (46.41%), Postives = 336/502 (66.93%), Query Frame = 0 
Query:   37 SYDHVVSEHKLIGKTIGQVFIETVEKFPDHEAVVFHRDKKRMTFAQLDEKVNKLAASIIGLGLQKGDRVGIWGQNHLEWMITFLASVKAGTILVNVNPAYQSNELEYALNKVGMKALFMTPEFKTSNYYDILQNVTPEILHSHPGELKSKKIPTLESVILTDGPAMSGAFSFEDALAIGGKEEKLKVEQLQKGIQF---DDPVNIQFTSGTTGNPKGATLTHHNLVNNAAAIAFGLDF---TPVD-RVCIPVPLYHCFGMVLGSMACLMTGAAQVFPQRGFNAEATLDAIQTESCTAIYGTPAMFIDMLNHPSFPNINFGSMRTGIMAGSPCPIEIMKKVISDMNCPEMTIAYGLTETSPATNLTSRDTPVELRVSSIGRVIPHVETKIID-EEGHIVPVNTSGELCFRGHCVFPGYWDDVIKTKEAIDENGWFHSGDLGQIDENGYCKVVGRLKDMIIRGGENIYPTEVENFLHNHPDIEDVQIVGIPDERFGEECCAWIK 530
            SY    ++  L  KT+GQ    T ++ P+ EA+V   +  R+TFAQL E+V+K A+ ++ +GL KGDR+G+WG N   W++  LA+ +AG ILV+VNPAYQ+ ELEY L KVG KAL    +FKT  YY++L+ + PE+ ++ PG LKS+++P L +VI  D P + G    ++ +A G   + L  +QLQ   QF    DP+NIQFTSGTTG+PKGATL+H+N+VNN+  +   L     TP   R+ +P PLYHC G V G+M CLM GA  +     FN +  L+AI  E  T +YGTP MF+D+LN P F + +  +M  G++AGSP P E+++ +I+ +N  ++ +AYG TE SP T     +  VE +  S+GR++PH E +I++ E G +  +NT GELC RG+CV  GYW +  KT+EA+D++ W+ +GD+  ++E G+CK+VGR KDMIIRGGENIYP E+E+F H HP +++VQ+VG+ D+R GEE CA I+
Sbjct:   59 SYVQGCTKKHLNSKTVGQCLETTAQRVPEREALVVLHEDVRLTFAQLKEEVDKAASGLLSIGLCKGDRLGMWGPNSYAWVLMQLATAQAGIILVSVNPAYQAMELEYVLKKVGCKALVFPKQFKTQQYYNVLKQICPEVENAQPGALKSQRLPDLTTVISVDAP-LPGTLLLDEVVAAGSTRQHL--DQLQYNQQFLSCHDPINIQFTSGTTGSPKGATLSHYNIVNNSNILGERLKLHEKTPEQLRMILPNPLYHCLGSVAGTMMCLMYGATLILASPIFNGKKALEAISRERGTFLYGTPTMFVDILNQPDFSSYDISTMCGGVIAGSPAPPELIRAIINKINMKDLVVAYGTTENSPVTFAHFPEDTVEQKAESVGRIMPHTEARIMNMEAGTLAKLNTPGELCIRGYCVMLGYWGEPQKTEEAVDQDKWYWTGDVATMNEQGFCKIVGRSKDMIIRGGENIYPAELEDFFHTHPKVQEVQVVGVKDDRMGEEICACIR 557
The following BLAST results are available for this feature:
BLAST of TCONS_00018396-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ACSF22.615e-16846.41Acyl-CoA synthetase family member 2, mitochondrial... [more]
back to top