TCONS_00018385-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00018385-protein
Unique NameTCONS_00018385-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length113

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00018385-protein ID=TCONS_00018385-protein|Name=TCONS_00018385-protein|organism=Clytia hemisphaerica|type=polypeptide|length=113bp
MDDFQGSEETAFVVEEVSNIIKESIEGSIGGNAYQHNKVNQWTSSVVETC
LNQLTKLGKPFKYIVTCVIMQKNGAGLHTASSCYWDNSSDGSCTVRWENK
TMYCIVSVFGLAI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010311XLOC_010311Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00018385TCONS_00018385Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005334Tctex
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005334Tctex-1PFAMPF03645Tctex-1coord: 16..111
e-value: 1.9E-33
score: 114.7

Blast
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BLAST of TCONS_00018385-protein vs. Swiss-Prot (Human)
Match: DYLT1 (Dynein light chain Tctex-type 1 OS=Homo sapiens GN=DYNLT1 PE=1 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 3.015e-70
Identity = 93/113 (82.30%), Postives = 108/113 (95.58%), Query Frame = 0 
Query:    1 MDDFQGSEETAFVVEEVSNIIKESIEGSIGGNAYQHNKVNQWTSSVVETCLNQLTKLGKPFKYIVTCVIMQKNGAGLHTASSCYWDNSSDGSCTVRWENKTMYCIVSVFGLAI 113
            M+D+Q +EETAFVV+EVSNI+KE+IE +IGGNAYQH+KVNQWT++VVE  L+QLTKLGKPFKYIVTCVIMQKNGAGLHTASSC+WD+S+DGSCTVRWENKTMYCIVS FGL+I
Sbjct:    1 MEDYQAAEETAFVVDEVSNIVKEAIESAIGGNAYQHSKVNQWTTNVVEQTLSQLTKLGKPFKYIVTCVIMQKNGAGLHTASSCFWDSSTDGSCTVRWENKTMYCIVSAFGLSI 113
The following BLAST results are available for this feature:
BLAST of TCONS_00018385-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DYLT13.015e-7082.30Dynein light chain Tctex-type 1 OS=Homo sapiens GN... [more]
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