TCONS_00018376-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00018376-protein
Unique NameTCONS_00018376-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length500

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00018376-protein ID=TCONS_00018376-protein|Name=TCONS_00018376-protein|organism=Clytia hemisphaerica|type=polypeptide|length=500bp
MMSMEQQNTDPLGLLSGIMEAEDLPTWSKVPVGKVLEPKEDKESPFPVNL
DINEKVCLWEGDITKLKCDVIINSTNEALNDKNPVSERIHKVAGPLLREE
VRQELQSCRTGEAKMTKGYELPARYVIHTVGPRYNTKYKTAAESALFMSY
RNVLQLARENNLSSIGLGVINTTRRGYPPEEGAHIALRTVRRFLEKNIDA
FQVVVFVVEPIDESTYKRLMPLYFPRDAREECYAAECLPSDVGNEDGEPF
LPERQIRIMDKPLKTMSGIDLLNSFVGRHPFSKVAADNDTKRKARLQGRS
QEEMEFLEHQRKYSQWVKRSRTEDFTEISKMGFLYNPGVDRNGRPVVVFV
GRYFPANAIDLNKAVSYFIHFMDSIASREYVLVYFHTLTTDDHTLDLGFL
KDFYELLDLKYRRNMHQLYIVHGNILQRILGWFFLMINAASIKDKVEFIQ
GVQYLYDYINPDQLEIPPFVMEFDVQENGPNYHTPVTSYHKTQNLRVDPS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010303XLOC_010303Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00018376TCONS_00018376Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002589Macro_dom
IPR001251CRAL-TRIO_dom
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002589Macro domainSMARTSM00506YBR022w_8coord: 55..186
e-value: 2.8E-22
score: 90.0
IPR002589Macro domainPFAMPF01661Macrocoord: 72..186
e-value: 2.4E-26
score: 92.0
IPR002589Macro domainPROSITEPS51154MACROcoord: 43..224
score: 24.211
IPR001251CRAL-TRIO lipid binding domainSMARTSM00516sec14_4coord: 325..475
e-value: 2.5E-11
score: 53.6
IPR001251CRAL-TRIO lipid binding domainGENE3D3.40.525.10coord: 313..467
e-value: 3.5E-28
score: 98.0
IPR001251CRAL-TRIO lipid binding domainPFAMPF13716CRAL_TRIO_2coord: 343..473
e-value: 1.8E-27
score: 96.0
IPR001251CRAL-TRIO lipid binding domainCDDcd00170SEC14coord: 323..467
e-value: 1.30257E-15
score: 73.1882
IPR001251CRAL-TRIO lipid binding domainSUPERFAMILY52087CRAL/TRIO domaincoord: 323..465
NoneNo IPR availableGENE3D3.40.220.10coord: 28..229
e-value: 7.3E-70
score: 234.3
NoneNo IPR availableCDDcd02905Macro_GDAP2_likecoord: 54..194
e-value: 4.67261E-77
score: 239.595
NoneNo IPR availableSUPERFAMILY52949Macro domain-likecoord: 41..254

Blast
[Close]
BLAST of TCONS_00018376-protein vs. Swiss-Prot (Human)
Match: GDAP2 (Ganglioside-induced differentiation-associated protein 2 OS=Homo sapiens GN=GDAP2 PE=1 SV=1)

HSP 1 Score: 483.026 bits (1242), Expect = 8.086e-168
Identity = 235/504 (46.63%), Postives = 340/504 (67.46%), Query Frame = 0 
Query:   10 DPLGLLSGIMEAEDLPTW---------SKVPVGKVLEPKEDKESPFPVNLDINEKVCLWEGDITKLKCDVIINSTNEALNDKNPVSERIHKVAGPLLREEVRQELQSCRTGEAKMTKGYELPARYVIHTVGPRYNTKYKTAAESALFMSYRNVLQLARENNLSSIGLGVINTTRRGYPPEEGAHIALRTVRRFLEKNIDAFQVVVFVVEPIDESTYKRLMPLYFPRDAREECYAAECLPSDVGNEDGEPFLPERQIRIMDKPLKTMS---------GIDLLNSFVGRHPFSKVAADNDTKRKARLQGRSQEEMEFLEHQRKYSQWVKRSRTEDFTEISKMGFLYNPGVDRNGRPVVVFVGRYFPANAIDLNKAVSYFIHFMDSIASREYVLVYFHTLTTDDHTLDLGFLKDFYELLDLKYRRNMHQLYIVHGNILQRILGWFFLMINAASIKDKVEFIQGVQYLYDYINPDQLEIPPFVMEFDVQENGPNYHTPVTSYHKTQNL 495
            DPLG  S  ++ + LP+W         S     ++ + ++   SPF  N D+N KV LW+GD+  L C  I+N++NE+L DKNPVSE I  +AGP L+E++ Q+L+ CRTGEAK+TKG+ L AR++IHTVGP+Y ++Y+TAAES+L+  YRNVLQLA+E ++SS+G  VIN+ +RGYP E+  HIALRTVRRFLE + +  + VVF V  ++E TY++L+PLYFPR  +EE  +   LP+D+GN +GEP +PERQIRI +KP              G+DL  SF+G H F+++  D D +RK  LQG+  E     +HQR Y++W+ ++R+ED ++I+ +  LY  GVD  GR V+V VGR  P   ID++KA+ YFIH MD IA +EYVLVYFHTLT++ + LD  FLK  Y+++D+KY+RN+  +Y VH     ++  WFF   + + +KDK+  +  +  L+  I+P+Q++ PPFV+E+D +ENGP Y    TSY  + +L
Sbjct:    2 DPLGAPSQFVDVDTLPSWGDSCQDELNSSDTTAEIFQ-EDTVRSPFLYNKDVNGKVVLWKGDVALLNCTAIVNTSNESLTDKNPVSESIFMLAGPDLKEDL-QKLKGCRTGEAKLTKGFNLAARFIIHTVGPKYKSRYRTAAESSLYSCYRNVLQLAKEQSMSSVGFCVINSAKRGYPLEDATHIALRTVRRFLEIHGETIEKVVFAVSDLEEGTYQKLLPLYFPRSLKEENRSLPYLPADIGNAEGEPVVPERQIRISEKPGAPEDNQEEEDEGLGVDL--SFIGSHAFARMEGDIDKQRKLILQGQLSEAALQKQHQRNYNRWLCQARSEDLSDIASLKALYQTGVDNCGRTVMVVVGRNIPVTLIDMDKALLYFIHVMDHIAVKEYVLVYFHTLTSEYNHLDSDFLKKLYDVVDVKYKRNLKAVYFVHPTFRSKVSTWFFTTFSVSGLKDKIHHVDSLHQLFSAISPEQIDFPPFVLEYDARENGPYY----TSYPPSPDL 497
The following BLAST results are available for this feature:
BLAST of TCONS_00018376-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GDAP28.086e-16846.63Ganglioside-induced differentiation-associated pro... [more]
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