TCONS_00018339-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00018339-protein
Unique NameTCONS_00018339-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1760

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00018339-protein ID=TCONS_00018339-protein|Name=TCONS_00018339-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1760bp
MSNTDDPELELELYYLVAKFLEDGPCQEAAKVLRSHLTKNKLIIPRKDWK
GDEHDRTFEEYDKLNNHVQQNHLLSLARELLNPEARTSFSKKLNSLVCRG
SFSLIKQNEKEKICKPASHKAACVHSAPFLPTFSRKTSSICTSLLARDVS
GTNFKSFIPKTANIYSKFSMHKRILGHLASVYCILFDHTGSIIVTGADDN
LLKVWSAYDGRLMATFRGHSQQITDITIDSSNQYIASGSLDKTIRVWNLH
NTYPIAVLQGHSGMVTSLQFCPCADPKVRYLISTGGDSNVCFWPWYPETG
EFSLTPVKFNEKTRAGVQMLCSSFSPGGSFLVAGSTDNYIRVYQLYPNEP
EKIAELPNHLDHVDSILYNNFGNRFLSGSRDGVALIWSYQNGEWQSKQLD
SSNPFKGDSLEANIVDPKNKLKVTMISWSTNDKYVITAATDFHIRLWDSY
KAELVRVLKGHTDEVYILETHPIEQNLLLSAGHDGNLILWDIESGSQVKR
FFNMLEGQGHGAIFDCKFSPTGQQFSATDSHGHLLIFGLRSNEMFERVPT
EQFFHTDYRPIIRDASNYVLDDQTQTAPHLMQPPYLVDIDGNPYTSEHQM
LIPGRTISNLPQRRAEQATQNLPPLLAEIAAAEAANRAPSANQRSAAENA
LLSPGGVGLRESGNIEGVRQENNQYISGDITDADAEAWRNRTIIPKNNLY
NQSEKDQKLLQHSIDEISNYNKEKRKRDRKPSESQDESHPGRRATTTRGR
GRSGRGGRGRGSTRSATSREQVVYVRPSALRHLNYLTPVNISDSEPDDWQ
GESSDTTTDDGDSDYVEESRRARTQRQRDTSAGASSQQNTRSERAERRKN
RAQRMAELVEGERSDVEEVDVIGSGDDDSERSEGEKSSSSDEEVNVEDHN
GEEDEGKRKTIQRARRSTRTKRRRKVHFPDTDDDDDNYEEEASEEASEEE
NEMKQEGVDDGEENEEGRGKRPQRRTQRKRRSQEPAVSRKTTERKQQNKN
QPKKKENRELLKSKKPLPSIDKLEEYLSVYAPPEWLSNKDCKKFPYFPQI
GDEVYYLKQGHHLYVKKVVEHNEYDIQENRQAYRRYDLSPAELCKLIGIQ
YDVGPPTMCSLKLELIGKRKSTGNRRTITVRFHDMPNVDDFLVLKHIFED
SLSQGWSVGDRFRCMIDATWYFGTIIEVSPLNEEFITSSFMSLVVRWDND
DEDRVSPWDLEPIPDDTVEEEAPITSEDKKLFEYIPSSEDWHYESPEHLR
PRALEGLKVFSALKIAAPFAYPVDVHTYPTYWSTIAFPTDLQTITERISN
NFYRRIESLLWEVRQLKNNAEKFNETGSGIIQDATLIVKILSTFLKDSEC
TDIIQLYNDTITENKKRDRFKSMESEEGGDFSGEDDEDEDDVIVKEEEEE
EGGSSAQGSSNAQNWTSEARSLLDFISSKDDAKPFLLPVDTEQFPDYTEC
VAEPIDISTIRHRLEQHQYGDAEAYIRDFQLMFRNSKTYNTDRRSPIYKM
TLRLSALFDSRCEAIRKAYSITVVNNTEHMTRNRSRRILRAFNDDPGPPD
DRPGPSNTRTSPTSQPTSPRKQDISKVTLADYIIKKPEATRSRRKTAVEE
EPEQGSSSSKKTRKSVMQKEAESEEYSEEEISENENSDEELDDKENIQYI
ENGHNTSPEVEHPSPRKSSRRSVRQPVKRVRYGFESDEEQEGESSSRHQP
KKMRKALNYSMDKKKVANNHNTKTPDGSKGKKIARKASTAATADNKRSSA
RSRSSVNYCX
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010298XLOC_010298Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00018339TCONS_00018339Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020472G-protein_beta_WD-40_rep
IPR001487Bromodomain
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom
IPR0110426-blade_b-propeller_TolB-like
IPR019775WD40_repeat_CS
IPR018359Bromodomain_CS
IPR017986WD40_repeat_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 842..862
NoneNo IPR availableCOILSCoilCoilcoord: 939..959
NoneNo IPR availableCOILSCoilCoilcoord: 1306..1326
NoneNo IPR availableGENE3D2.40.50.140coord: 212..239
e-value: 5.6E-14
score: 51.0
NoneNo IPR availableGENE3D2.80.10.50coord: 240..330
e-value: 8.5E-20
score: 70.4
NoneNo IPR availableGENE3D2.80.10.50coord: 169..211
e-value: 4.9E-11
score: 42.3
NoneNo IPR availableCDDcd00200WD40coord: 170..491
e-value: 9.93023E-59
score: 205.647
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 478..492
score: 35.53
coord: 193..207
score: 27.86
coord: 235..249
score: 42.31
IPR001487BromodomainPRINTSPR00503BROMODOMAINcoord: 1430..1443
score: 35.71
coord: 1478..1497
score: 32.07
coord: 1460..1478
score: 29.75
coord: 1444..1460
score: 41.3
IPR001487BromodomainSMARTSM00297bromo_6coord: 1412..1517
e-value: 9.6E-23
score: 91.6
coord: 1245..1350
e-value: 6.1E-7
score: 39.1
IPR001487BromodomainGENE3D1.20.920.10coord: 961..1370
e-value: 1.4E-20
score: 72.9
IPR001487BromodomainGENE3D1.20.920.10coord: 1382..1526
e-value: 5.4E-32
score: 109.8
IPR001487BromodomainPFAMPF00439Bromodomaincoord: 1263..1335
e-value: 2.4E-12
score: 46.7
coord: 1421..1500
e-value: 1.0E-19
score: 70.3
IPR001487BromodomainPROSITEPS50014BROMODOMAIN_2coord: 1427..1497
score: 17.563
IPR001487BromodomainPROSITEPS50014BROMODOMAIN_2coord: 1261..1331
score: 13.989
IPR001487BromodomainSUPERFAMILY47370Bromodomaincoord: 1411..1519
IPR001487BromodomainSUPERFAMILY47370Bromodomaincoord: 1237..1346
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 303..344
e-value: 2.1
score: 15.0
coord: 251..294
e-value: 4.5E-4
score: 29.5
coord: 209..248
e-value: 5.9E-10
score: 49.1
coord: 451..491
e-value: 1.9E-6
score: 37.4
coord: 167..206
e-value: 3.5E-5
score: 33.2
coord: 349..388
e-value: 0.0021
score: 27.3
coord: 494..538
e-value: 55.0
score: 6.0
coord: 407..448
e-value: 0.032
score: 23.4
IPR001680WD40 repeatPFAMPF00400WD40coord: 321..343
e-value: 0.19
score: 12.6
coord: 174..206
e-value: 6.2E-4
score: 20.4
coord: 423..448
e-value: 0.14
score: 13.0
coord: 211..248
e-value: 9.8E-8
score: 32.5
coord: 454..491
e-value: 0.18
score: 12.7
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 423..457
score: 10.508
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 458..500
score: 13.316
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 258..293
score: 8.637
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 174..215
score: 13.516
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 356..397
score: 10.809
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 216..257
score: 15.354
IPR015943WD40/YVTN repeat-like-containing domainGENE3D2.130.10.10coord: 430..759
e-value: 1.5E-26
score: 92.7
IPR011042Six-bladed beta-propeller, TolB-likeGENE3D2.120.10.30coord: 331..429
e-value: 1.5E-13
score: 50.2
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 478..492
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 235..249
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 435..449
IPR018359Bromodomain, conserved sitePROSITEPS00633BROMODOMAIN_1coord: 1432..1489
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 174..500
score: 49.883
IPR017986WD40-repeat-containing domainSUPERFAMILY50978WD40 repeat-likecoord: 167..542

Blast
BLAST of TCONS_00018339-protein vs. Swiss-Prot (Human)
Match: PHIP (PH-interacting protein OS=Homo sapiens GN=PHIP PE=1 SV=2)

HSP 1 Score: 659.448 bits (1700), Expect = 0.000e+0
Identity = 338/762 (44.36%), Postives = 467/762 (61.29%), Query Frame = 0
Query:    8 ELELELYYLVAKFLEDGPCQEAAKVLRSHLTKNKLIIPRKDWKGDEHDRTFEEYDKLNNHVQQNHLLSLAREL---LNPEARTSFSKKLNSLVCRGSFSLIKQNEKEKICKPASHKAACVHSA--PFLPTFSRKTSSICTSLLARDVSGT-NFKSFIPKTANIYSKFSMHKRILGHLASVYCILFDHTGSIIVTGADDNLLKVWSAYDGRLMATFRGHSQQITDITIDSSNQYIASGSLDKTIRVWNLHNTYPIAVLQGHSGMVTSLQFCPCADPKVRYLISTGGDSNVCFWPWYPETGEFSLTPVKFNEKTRAGVQMLCSSFSPGGSFLVAGSTDNYIRVYQLYPNEPEKIAELPNHLDHVDSILYNNFGNRFLSGSRDGVALIWSYQNGEWQSKQLDSSNPFKGDSLEANIVDPKNKLKVTMISWSTNDKYVITAATDFHIRLWDSYKAELVRVLKGHTDEVYILETHPIEQNLLLSAGHDGNLILWDIESGSQVKRFFNMLEGQGHGAIFDCKFSPTGQQFSATDSHGHLLIFGLRSNEMFERVPTEQFFHTDYRPIIRDASNYVLDDQTQTAPHLMQPPYLVDIDGNPYTSEHQMLIPGR--------------TISNLPQRRAEQATQNLPPLLAEI------------AAAEAANRAPSANQRSAAENALLSPGGVGLRESGNIEGVRQENNQYISGDI-TDADAEAWRNRTIIPKNNLYNQSEKDQKLLQHSIDEISNY-NKEKRKRDRKPSESQ 735
            EL  ELY+L+A+FLEDGPCQ+AA+VL   + + +L+  R DW G EH RT++   K   H+  +HLL +   L   L  E   S    + +L+  G  SL++ N+  K         A +H    P  P       SI  +L +R ++G    +  +P    +Y    MHKRILGHL+SVYC+ FD TG  I TG+DD L+K+W+  DGRL+AT RGH+ +I+D+ ++  N  IA+GS DK IRVW L    P+AVLQGHS  +TSLQF P      RYL STG D  +CFW W   T + +  P KF E+ R GVQM+CSSFS GG FL  GSTD+ IRVY     +PEKI+EL  H D VDSI ++N  NRF+SGSRDG A IW ++  EW+S  LD +    G +L+  I D   K+KVTM++W  +D  VITA  +  +++W+SY  +L+ VL GH DEV++LE HP +  +L SAGHDGN+I+WD+  G +++ +FNM+EGQGHGA+FDCK SP GQ F+ TDSHGHLLIFG  S+  ++++  + FFH+DYRP+IRDA+N+VLD+QTQ APHLM PP+LVD+DGNP+ S +Q L+PGR              T S L Q  ++QA Q + PL + I              A  +N +  +    ++ + + SP  VGLR SG IEGVRQ ++     +I T+ D  AW  R ++P+ +    S +++       +EI  Y ++EKRK    P E++
Sbjct:   10 ELRSELYFLIARFLEDGPCQQAAQVLIREVAEKELLPRRTDWTGKEHPRTYQNLVKYYRHLAPDHLLQICHRLGPLLEQEIPQSVPG-VQTLLGAGRQSLLRTNKSCKHVVWKGSALAALHCGRPPESPVNYGSPPSIADTLFSRKLNGKYRLERLVPTA--VYQHMKMHKRILGHLSSVYCVTFDRTGRRIFTGSDDCLVKIWATDDGRLLATLRGHAAEISDMAVNYENTMIAAGSCDKMIRVWCLRTCAPLAVLQGHSASITSLQFSPLCSGSKRYLSSTGADGTICFWLWDAGTLKINPRPAKFTERPRPGVQMICSSFSAGGMFLATGSTDHIIRVYFFGSGQPEKISELEFHTDKVDSIQFSNTSNRFVSGSRDGTARIWQFKRREWKSILLDMATRPAGQNLQG-IEDKITKMKVTMVAWDRHDNTVITAVNNMTLKVWNSYTGQLIHVLMGHEDEVFVLEPHPFDPRVLFSAGHDGNVIVWDLARGVKIRSYFNMIEGQGHGAVFDCKCSPDGQHFACTDSHGHLLIFGFGSSSKYDKIADQMFFHSDYRPLIRDANNFVLDEQTQQAPHLMPPPFLVDVDGNPHPSRYQRLVPGRENCREEQLIPQMGVTSSGLNQVLSQQANQEISPLDSMIQRLQQEQDLRRSGEAVISNTSRLSRGSISSTSEVHSPPNVGLRRSGQIEGVRQMHSNAPRSEIATERDLVAWSRRVVVPELSAGVASRQEEWRTAKGEEEIKTYRSEEKRKHLTVPKENK 767          

HSP 2 Score: 367.851 bits (943), Expect = 2.455e-103
Identity = 191/521 (36.66%), Postives = 288/521 (55.28%), Query Frame = 0
Query: 1023 LEEYLSVYAPPEWLSNKDCKKFPYFPQIGDEVYYLKQGHHLYVKKVVEHNEYDIQENRQAYRRYDLSPAELCKLIGIQYDVGPPTMCSLKLELIGKRKSTGNRRTITVRFHDMPNVDDFLVLKHIFEDSLSQGWSVGDRFRCMIDATWYFGTIIEVSPLNEEFITSSFMSLVVRWDNDDEDRVSPWDLEPIPDDTVEEE-----APITSEDKKLFEYIPSSEDWHYESPEHLRPRALEGLKVFSALKIAAPFAYPVDVHTYPTYWSTIAFPTDLQTITERISNNFYRRIESLLWEVRQLKNNAEKFNETGSGIIQDATLIVKILSTFLKDSECTDIIQLYNDTITENKKRDRFKSMESEEGGDFSGEDDEDEDDVIVKEEEEEEGGSSAQGSSNAQNWTSEARSLLDFISSKDDAKPFLLPVDTEQFPDYTECVAEPIDISTIRHRLEQHQYGDAEAYIRDFQLMFRNSKTYNTDRRSPIYKMTLRLSALFDSRCEAIRKAY-SITVVNNTEHMTRNRSRR 1537
            LEE+L    P  W+++   ++ P+ PQ+GDEVYY +QGH  YV+   ++  Y I   +Q + + +L   EL K++GI+Y+VG PT+C LKL  +          + T+++HDMP+V DFLVL+  F+D+  + W++GDRFR +ID  W+FGTI    PL  E+  S F    V WDN D +++SPWD+E IP++ V  E      P+T  + +   Y P   +W     +    R + G+     L IA+ F  PVD+  YP Y + +A+PTDL TI +R+ N FYRR+ SL+WEVR +++N   FNE GS I++ A  +  +L  F+KD  C +II LYN      KK+    S + E+  D  G       D     +      + AQ S + Q W  +   LL+ I   +D++PF  PVD  ++PDY + +  P+D +T+R  LE   Y       +D +L+F NSK Y   +RS IY M+LRLSA F+    ++   Y S    +    +T+ R +R
Sbjct:  937 LEEWL----PSTWITDTIPRRCPFVPQMGDEVYYFRQGHEAYVEMARKNKIYSINPKKQPWHKMELREQELMKIVGIKYEVGLPTLCCLKLAFLDPDTGKLTGGSFTMKYHDMPDVIDFLVLRQQFDDAKYRRWNIGDRFRSVIDDAWWFGTIESQEPLQLEYPDSLFQCYNVCWDNGDTEKMSPWDMELIPNNAVFPEELGTSVPLTDGECRSLIYKPLDGEWGTNPRDEECERIVAGINQLMTLDIASAFVAPVDLQAYPMYCTVVAYPTDLSTIKQRLENRFYRRVSSLMWEVRYIEHNTRTFNEPGSPIVKSAKFVTDLLLHFIKDQTCYNIIPLYNSM----KKKVLSDSEDEEKDADVPGTSTRKRKD----HQPRRRLRNRAQ-SYDIQAWKKQCEELLNLIFQCEDSEPFRQPVDLLEYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNSKAYTPSKRSRIYSMSLRLSAFFEEHISSVLSDYKSALRFHKRNTITKRRKKR 1444          
The following BLAST results are available for this feature:
BLAST of TCONS_00018339-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PHIP2.455e-10344.36PH-interacting protein OS=Homo sapiens GN=PHIP PE=... [more]
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