TCONS_00018331-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00018331-protein
Unique NameTCONS_00018331-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length341

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00018331-protein ID=TCONS_00018331-protein|Name=TCONS_00018331-protein|organism=Clytia hemisphaerica|type=polypeptide|length=341bp
LKELKVPKHWMSEFFYSSVELELHMAEEALTRYQDISAAGFNGSSYVNSQ
IAICLYNLRDFDNSVEYFRELYDADPEMLEHIDVYSNILYIQEDRPELSH
LAHHVCKVDKYRTESCVVIGNYYSLRGDHDKAVMYFKQALRLNSNYVAAW
TLLGHEYVELKNTSAAILSYRKATGVNPHDFRGWYGLGQTYELLNMPFYS
LCYFKEAQKLRPNDPRMLIALGDTYNTIENLNEAKKCFLRAVRLGDSEGQ
AIVKLGRLQEQCNEMEEAALSYTKYIKRLENSVHISEDIAHACLFLARHH
LDLKQYDEATTYARKAMEYTESRDEGKTLMFEISQMSSSVK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010296XLOC_010296Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00018331TCONS_00018331Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom
IPR013026TPR-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 290..323
e-value: 9.5
score: 15.2
coord: 215..248
e-value: 13.0
score: 14.1
coord: 45..78
e-value: 9.7
score: 15.1
coord: 113..146
e-value: 9.1E-5
score: 31.8
coord: 249..282
e-value: 120.0
score: 5.4
coord: 147..180
e-value: 0.0059
score: 25.8
coord: 181..214
e-value: 4.6
score: 16.2
IPR019734Tetratricopeptide repeatPFAMPF13181TPR_8coord: 149..179
e-value: 1.1E-4
score: 22.0
coord: 216..244
e-value: 0.0023
score: 17.9
coord: 290..320
e-value: 0.025
score: 14.7
coord: 50..77
e-value: 0.15
score: 12.3
coord: 114..145
e-value: 6.8E-5
score: 22.7
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 181..214
score: 7.021
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 290..323
score: 6.844
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 215..248
score: 8.555
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 45..78
score: 7.877
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 113..146
score: 10.237
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 147..180
score: 10.414
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 249..282
score: 6.343
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 213..264
e-value: 1.9E-10
score: 40.5
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 265..336
e-value: 2.6E-7
score: 30.1
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 147..212
e-value: 2.7E-13
score: 49.6
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 15..132
e-value: 9.0E-12
score: 44.4
IPR011990Tetratricopeptide-like helical domainSUPERFAMILY48452TPR-likecoord: 21..114
IPR011990Tetratricopeptide-like helical domainSUPERFAMILY48452TPR-likecoord: 114..319
NoneNo IPR availableGENE3D1.10.287.1110coord: 133..146
e-value: 3.7E-4
score: 19.8
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 45..323
score: 35.4

Blast
[Close]
BLAST of TCONS_00018331-protein vs. Swiss-Prot (Human)
Match: CDC23 (Cell division cycle protein 23 homolog OS=Homo sapiens GN=CDC23 PE=1 SV=3)

HSP 1 Score: 359.762 bits (922), Expect = 1.349e-120
Identity = 170/338 (50.30%), Postives = 239/338 (70.71%), Query Frame = 0 
Query:    1 LKELKVPKHWMSEFFYSSVELELHMAEEALTRYQDISAAGFNGSSYVNSQIAICLYNLRDFDNSVEYFRELYDADPEMLEHIDVYSNILYIQEDRPELSHLAHHVCKVDKYRTESCVVIGNYYSLRGDHDKAVMYFKQALRLNSNYVAAWTLLGHEYVELKNTSAAILSYRKATGVNPHDFRGWYGLGQTYELLNMPFYSLCYFKEAQKLRPNDPRMLIALGDTYNTIENLNEAKKCFLRAVRLGDSEGQAIVKLGRLQEQCNEMEEAALSYTKYIKRLENSVHISEDIAHACLF--LARHHLDLKQYDEATTYARKAMEYTESRDEGKTLMFEISQM 336
            LK L +P  WM EFF + +  EL + EEAL +YQ++   GF+ SSY+ SQIA+  +N+RD D ++  F EL   DP  +E++D +SN+LY++  + ELS+LAH++C++DKYR E+C VIGNYYSLR  H+KA +YF++AL+LN  Y+ AWTL+GHEY+E+KNTSAAI +YR A  VN  D+R WYGLGQTYE+L MPFY L Y++ A +LRPND RML+ALG+ Y  +  L EAKKC+ RA  +GD E  A+VKL +L EQ  E E+AA  Y KYI+ + +   I E +  +  F  LA+++   K +DEA+T A+K   + ++R+EGK L+ +I Q+
Sbjct:  219 LKFLSLPDTWMKEFFLAHIYTELQLIEEALQKYQNLIDVGFSKSSYIVSQIAVAYHNIRDIDKALSIFNELRKQDPYRIENMDTFSNLLYVRSMKSELSYLAHNLCEIDKYRVETCCVIGNYYSLRSQHEKAALYFQRALKLNPRYLGAWTLMGHEYMEMKNTSAAIQAYRHAIEVNKRDYRAWYGLGQTYEILKMPFYCLYYYRRAHQLRPNDSRMLVALGECYEKLNQLVEAKKCYWRAYAVGDVEKMALVKLAKLHEQLTESEQAAQCYIKYIQDIYSCGEIVEHLEESTAFRYLAQYYFKCKLWDEASTCAQKCCAFNDTREEGKALLRQILQL 556
The following BLAST results are available for this feature:
BLAST of TCONS_00018331-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CDC231.349e-12050.30Cell division cycle protein 23 homolog OS=Homo sap... [more]
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