TCONS_00018292-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00018292-protein
Unique Name	TCONS_00018292-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	675

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00018292-protein ID=TCONS_00018292-protein|Name=TCONS_00018292-protein|organism=Clytia hemisphaerica|type=polypeptide|length=675bp
MDHIKTPKVDNVRLEDVSSTLPGVKGTLHLTTTHLIFVDPNGTKETWILY
SQISEVEKLPLTARGSAVRVRTRTFRHVKFVITRDRECTDVFDTIQKLSS
PTKTDELYAFVYNPKHIELTQEAGWTLYDPVAEYERMEVPKSLWTRSTLN
QNYKLCETYPNTLYFPSSVSAPLIKECAQFRSKSRLPALSYYNKKAQTAL
CRCAQPMAGLNNRCPEDEAMLQAIIKSTPGTSRMYIVDTRPKINAMANRA
AGKGYENVAHYENIDFHFIGIENIHVMRQSLQKLIEVFDTKDLSMSSYLR
GLEESGWFKHIKNVLDTSMFIARAVYYEKRSVLVHCSDGWDRTAQTCSMA
QIMLDPYYRTIHGFQVLVEKEWLSFGHKFVHRYGLLSGDPKEVSPIFTQF
LEACWQLTLQFPTGFQFNERFLLDLHEHLYSCQFGTFLGNCEKERKDSRL
NRRTYSLWGYMWQNLPDYINPFYKEGLHGVLNPSSHPQQFRFWRSLYNRY
VDKVHPRESIADRICSLNDHNDSLRDHIRFLEKKIEKLATKDKEATSKNE
NESETEIENESSETTTTTTTTTANDTSTEESGSKDQIDHVTSSSSNDDVN
DTEAVTSFVVEWDSFRGVHQCSCCKPVDSLSRKYHCWNCGKVFCAECVNK
SSELPGHYSGNQVPVCKICYKKLRK

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_010270	XLOC_010270	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00018292	TCONS_00018292	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR003595	Tyr_Pase_cat
IPR000306	Znf_FYVE
IPR029021	Prot-tyrosine_phosphatase-like
IPR013083	Znf_RING/FYVE/PHD
IPR010569	Myotubularin-like_Pase_dom
IPR011993	PH_dom-like
IPR016130	Tyr_Pase_AS
IPR017455	Znf_FYVE-rel
IPR011011	Znf_FYVE_PHD

Vocabulary: **Molecular Function**
Term	Definition
GO:0046872	metal ion binding
GO:0004725	protein tyrosine phosphatase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0016311	dephosphorylation

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016311	dephosphorylation
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0004725	protein tyrosine phosphatase activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 521..548
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 541..600
None	No IPR available	CDD	cd15738	FYVE_MTMR_unchar	coord: 610..670 e-value: 3.44453E-26 score: 101.635
IPR003595	Protein-tyrosine phosphatase, catalytic	SMART	SM00404	ptp_7	coord: 262..430 e-value: 3.7E-4 score: 26.5
IPR000306	FYVE zinc finger	SMART	SM00064	fyve_4	coord: 607..675 e-value: 2.6E-4 score: 25.9
IPR000306	FYVE zinc finger	PFAM	PF01363	FYVE	coord: 611..674 e-value: 1.7E-9 score: 37.6
IPR029021	Protein-tyrosine phosphatase-like	GENE3D	3.90.190.10		coord: 135..553 e-value: 5.5E-5 score: 22.1
IPR029021	Protein-tyrosine phosphatase-like	SUPERFAMILY	52799	(Phosphotyrosine protein) phosphatases II	coord: 121..501
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10		coord: 598..675 e-value: 5.7E-12 score: 44.8
IPR010569	Myotubularin-like phosphatase domain	PFAM	PF06602	Myotub-related	coord: 107..446 e-value: 5.5E-143 score: 476.1
IPR010569	Myotubularin-like phosphatase domain	PROSITE	PS51339	PPASE_MYOTUBULARIN	coord: 124..497 score: 122.589
IPR011993	PH domain-like	GENE3D	2.30.29.30		coord: 1..98 e-value: 1.2E-29 score: 101.8
IPR011993	PH domain-like	SUPERFAMILY	50729	PH domain-like	coord: 19..113
IPR016130	Protein-tyrosine phosphatase, active site	PROSITE	PS00383	TYR_PHOSPHATASE_1	coord: 334..344
IPR017455	Zinc finger, FYVE-related	PROSITE	PS50178	ZF_FYVE	coord: 615..674 score: 10.494
IPR011011	Zinc finger, FYVE/PHD-type	SUPERFAMILY	57903	FYVE/PHD zinc finger	coord: 611..673

Blast

[Close]

BLAST of TCONS_00018292-protein vs. Swiss-Prot (Human)
Match: MTMR6 (Myotubularin-related protein 6 OS=Homo sapiens GN=MTMR6 PE=1 SV=3)

HSP 1 Score: 614.379 bits (1583), Expect = 0.000e+0
Identity = 284/553 (51.36%), Postives = 390/553 (70.52%), Query Frame = 0

Query:    1 MDHIKTPKVDNVRLED-VSSTLPGVKGTLHLTTTHLIFVDPNGTKETWILYSQISEVEKLPLTARGSAVRVRTRTFRHVKFVITRDRECTDVFDTIQKLSSPTKTDELYAFVYNPKHIELTQEAGWTLYDPVAEYERMEVPKSLWTRSTLNQNYKLCETYPNTLYFPSSVSAPLIKECAQFRSKSRLPALSYYNKKAQTALCRCAQPMAGLNNRCPEDEAMLQAIIKSTPGTSRMYIVDTRPKINAMANRAAGKGYENVAHYENIDFHFIGIENIHVMRQSLQKLIEVFDTKDLSMSSYLRGLEESGWFKHIKNVLDTSMFIARAVYYEKRSVLVHCSDGWDRTAQTCSMAQIMLDPYYRTIHGFQVLVEKEWLSFGHKFVHRYGLLSGDPKEVSPIFTQFLEACWQLTLQFPTGFQFNERFLLDLHEHLYSCQFGTFLGNCEKERKDSRLNRRTYSLWGYMWQNLPDYINPFYKEGLH--GVLNPSSHPQQFRFWRSLYNRYVDKVHPRESIADRICSLNDHNDSLRDHIRFLEKKIEKLATKDKEATSKNE 550
            M+HI+T KV+ V+L D  S++   + GTL+LT THL+F+D +  KETWIL+  I+ VEKL LT  G  + ++ + FR V F++ R+R+C D+++++ +LS   K ++LYAF YNPK  +  +  GW L D   EY+RM VP S W  S  N++YK+CETYP  LY P   S P+I   ++FRSK R P LSYY++  + A+CRC+QP++G + RC EDE +LQAI K+ P    MY++DTRPK+NAMANRAAGKGYEN  +Y NI F F+GIENIHVMR SLQKL+EV  TK LS++ +  GLE SGW +HIK V+D ++F+A+A+  E  SVLVHCSDGWDRT+Q CS+  ++LD YYRTI GF VL+EK+W+SFGHKF  R G L GDPKEVSP+FTQFLE  W LT QFP  F+F+E FLL +HEH++SCQFG FLGNC+KER++ +L  +TYSLW ++ ++   Y+NP Y    H   VL P++    F+FWR++Y+++   +HPR+S+ + I ++N+ N  L   I+ LE KI++   K  +     E
Sbjct:    1 MEHIRTTKVEQVKLLDRFSTSNKSLTGTLYLTATHLLFIDSH-QKETWILHHHIASVEKLALTTSGCPLVIQCKNFRTVHFIVPRERDCHDIYNSLLQLSKQAKYEDLYAFSYNPKQNDSERLQGWQLIDLAEEYKRMGVPNSHWQLSDANRDYKICETYPRELYVPRIASKPIIVGSSKFRSKGRFPVLSYYHQDKEAAICRCSQPLSGFSARCLEDEHLLQAISKANPVNRYMYVMDTRPKLNAMANRAAGKGYENEDNYSNIRFQFVGIENIHVMRSSLQKLLEVNGTKGLSVNDFYSGLESSGWLRHIKAVMDAAIFLAKAITVENASVLVHCSDGWDRTSQVCSLGSLLLDSYYRTIKGFMVLIEKDWISFGHKFSERCGQLDGDPKEVSPVFTQFLECVWHLTEQFPQAFEFSEAFLLQIHEHIHSCQFGNFLGNCQKEREELKLKEKTYSLWPFLLEDQKKYLNPLYSSESHRFTVLEPNTVSFNFKFWRNMYHQFDRTLHPRQSVFNIIMNMNEQNKQLEKDIKDLESKIKQRKNKQTDGILTKE 552

The following BLAST results are available for this feature:

BLAST of TCONS_00018292-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00018292-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
MTMR6	0.000e+0	51.36	Myotubularin-related protein 6 OS=Homo sapiens GN=...	[more]

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TCONS_00018292-protein (polypeptide) - C. hemisphaerica