TCONS_00018253-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00018253-protein
Unique NameTCONS_00018253-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length713

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00018253-protein ID=TCONS_00018253-protein|Name=TCONS_00018253-protein|organism=Clytia hemisphaerica|type=polypeptide|length=713bp
MTMTEVISERSSSVPGESEDDELLTPREKKPKIEKDLDDVFLENKKPTPE
DLSPQRAQYGYQGSTARQTPERTYSTNSSNGSEIAKQEIPSSNLPNIFNV
SCSASTMPSIVNTPTTGQSSYPSNMDTLIDYNSLTKQYHSASNLLQNITK
TPYFDSSTGKYTENNVANNTSNSPPAGGKYFDNKYNFTGSQSEFNGRSSV
TSSNYSFGPSNMLQSGFPPPQSIISKSLTQFAGSGYLPPTTSYPSLGSNP
ASFNAPYFNQKFASTDNNNYLYPNLFSSSTKLPAYSTSQGSTQIFPPPFG
NNGLFPSSGMNSPLLPGSNNVPESPTNGSSYNQNPIVGNNSAGSQAPTTA
SPFSPTIPLMGNSTHNNQLNSSSSSNFETRMNFPSDSSYNSYLEMEHGTP
INYNSPTEKYSTRSNRKSKLQNGVKKASKSKKSLQSDPEHSYDRVFIWDL
DETILVFHSLITGEFASKFGKDPSTASTIGFRLEEMIYHIASSHLFFSDL
EECDQVHVDDISTDDTGQDLNDYNFESDGFCNSSSSSVLQFPVAGRRGVD
WNRKLAFRYRRIKEMYNAYRNNIDDLLGPGKREQWLPLRMEMENLSDSWH
TLASKCIYTIKKRASCLNVLVTSSHLIPTLAKCMLFGLTDYFPAENIYSA
NKDGKEACFQRVQSRFGRKCTYVVVGNGRAEEIPSKQLGIPFWRVTNHGD
LVNLHHALELGHL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010259XLOC_010259Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00018253TCONS_00018253Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006545EYA_dom
Vocabulary: Biological Process
TermDefinition
GO:0007275multicellular organism development
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007275 multicellular organism development
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006545EYA domainTIGRFAMTIGR01658TIGR01658coord: 444..712
e-value: 5.9E-88
score: 293.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 303..381
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..90
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 400..436

Blast
[Close]
BLAST of TCONS_00018253-protein vs. Swiss-Prot (Human)
Match: EYA1 (Eyes absent homolog 1 OS=Homo sapiens GN=EYA1 PE=1 SV=2)

HSP 1 Score: 384.8 bits (987), Expect = 3.989e-125
Identity = 170/320 (53.12%), Postives = 233/320 (72.81%), Query Frame = 0 
Query:  406 PTEKYST--------RSNRKSKLQNGVKKASKSKKSLQSDP----EHSYDRVFIWDLDETILVFHSLITGEFASKFGKDPSTASTIGFRLEEMIYHIASSHLFFSDLEECDQVHVDDISTDDTGQDLNDYNFESDGFCNSSSSSVLQFPVAGRRGVDWNRKLAFRYRRIKEMYNAYRNNIDDLLGPGKREQWLPLRMEMENLSDSWHTLASKCIYTIKKRASCLNVLVTSSHLIPTLAKCMLFGLTDYFPAENIYSANKDGKEACFQRVQSRFGRKCTYVVVGNGRAEEIPSKQLGIPFWRVTNHGDLVNLHHALELGHL 713
            PT +YST        + +   +L+ G    S+ +    ++P    +   +RVFIWDLDETI+VFHSL+TG +A+++G+DP T+ ++G R+EEMI+++A +HLFF+DLEECDQVH+DD+S+DD GQDL+ YNF +DGF  +++S+ L      R GVDW RKLAFRYRR+KE+YN Y+NN+  LLGP KRE WL LR E+E L+DSW TLA K +  I  R +C+N+LVT++ LIP LAK +L+GL   FP ENIYSA K GKE+CF+R+  RFGRK  YVV+G+G  EE  +K+  +PFWR+++H DL+ LHHALEL +L
Sbjct:  273 PTAEYSTIHSPSTPIKDSDSDRLRRGSDGKSRGRGRRNNNPSPPPDSDLERVFIWDLDETIIVFHSLLTGSYANRYGRDPPTSVSLGLRMEEMIFNLADTHLFFNDLEECDQVHIDDVSSDDNGQDLSTYNFGTDGFPAAATSANLCLATGVRGGVDWMRKLAFRYRRVKEIYNTYKNNVGGLLGPAKREAWLQLRAEIEALTDSWLTLALKALSLIHSRTNCVNILVTTTQLIPALAKVLLYGLGIVFPIENIYSATKIGKESCFERIIQRFGRKVVYVVIGDGVEEEQGAKKHAMPFWRISSHSDLMALHHALELEYL 592
The following BLAST results are available for this feature:
BLAST of TCONS_00018253-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
EYA13.989e-12553.13Eyes absent homolog 1 OS=Homo sapiens GN=EYA1 PE=1... [more]
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