TCONS_00018183-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00018183-protein
Unique NameTCONS_00018183-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length237

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00018183-protein ID=TCONS_00018183-protein|Name=TCONS_00018183-protein|organism=Clytia hemisphaerica|type=polypeptide|length=237bp
XRIVKSRLTDAKESHVEMEENAKLLATPTNVNAKKGYEGKNCEIKTDRCK
GVTCRNGGKCKTVGNTYKCECKKGYEGKNCEIKTDRCKGVTCQNGGKCKT
VGNTYKCECKKGYEGKNCEIKTDRCKGVTCRNGGRCKTVGNTYKCECKKG
YEGKNCEIKTDRCKGAPCRNGGKCKTVGNTYKCECRKGYEGQHCEIENDR
CRGIVCQNGGKCKTVGDSFKCKCRRGFTGKHCENRPY
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010213XLOC_010213Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00018183TCONS_00018183Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001881EGF-like_Ca-bd_dom
IPR000742EGF-like_dom
IPR013032EGF-like_CS
IPR009030Growth_fac_rcpt_
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001881EGF-like calcium-binding domainSMARTSM00179egfca_6coord: 197..233
e-value: 0.0017
score: 24.2
coord: 159..195
e-value: 9.7E-4
score: 26.1
coord: 83..119
e-value: 0.0023
score: 23.1
coord: 121..157
e-value: 0.0027
score: 22.6
coord: 45..81
e-value: 0.0028
score: 22.4
IPR000742EGF-like domainSMARTSM00181egf_5coord: 124..157
e-value: 3.9E-5
score: 33.1
coord: 48..81
e-value: 5.9E-5
score: 32.5
coord: 86..119
e-value: 2.1E-5
score: 33.9
coord: 162..195
e-value: 1.8E-5
score: 34.2
coord: 200..233
e-value: 2.1E-6
score: 37.3
IPR000742EGF-like domainPFAMPF00008EGFcoord: 87..117
e-value: 3.8E-7
score: 30.2
coord: 125..155
e-value: 2.9E-6
score: 27.4
coord: 163..192
e-value: 5.8E-6
score: 26.4
coord: 49..79
e-value: 2.6E-6
score: 27.5
coord: 206..231
e-value: 8.2E-6
score: 25.9
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 121..157
score: 18.58
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 197..233
score: 20.098
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 159..195
score: 20.263
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 83..119
score: 18.717
IPR000742EGF-like domainPROSITEPS50026EGF_3coord: 45..81
score: 18.456
NoneNo IPR availableGENE3D2.10.25.10coord: 170..189
e-value: 3.9E-11
score: 42.3
coord: 131..150
e-value: 9.4E-11
score: 41.0
NoneNo IPR availableGENE3D2.60.120.200coord: 75..92
e-value: 0.03
score: 13.5
coord: 190..205
e-value: 0.013
score: 14.7
coord: 151..169
e-value: 0.011
score: 14.9
coord: 114..130
e-value: 0.035
score: 13.3
NoneNo IPR availableGENE3D2.10.25.10coord: 93..113
e-value: 5.4E-11
score: 41.6
NoneNo IPR availableGENE3D2.10.25.10coord: 206..236
e-value: 5.7E-10
score: 38.6
coord: 50..74
e-value: 1.1E-10
score: 40.9
NoneNo IPR availableGENE3D2.10.25.10coord: 32..49
e-value: 0.059
score: 12.9
NoneNo IPR availablePRODOMPD936484coord: 52..232
e-value: 5.0E-8
score: 137.0
NoneNo IPR availableCDDcd00054EGF_CAcoord: 54..81
e-value: 0.00271395
score: 33.379
NoneNo IPR availableCDDcd00054EGF_CAcoord: 205..233
e-value: 0.00114013
score: 34.5346
NoneNo IPR availableCDDcd00054EGF_CAcoord: 130..157
e-value: 0.0019756
score: 33.7642
NoneNo IPR availableCDDcd00054EGF_CAcoord: 165..195
e-value: 4.91227E-4
score: 35.305
NoneNo IPR availableCDDcd00054EGF_CAcoord: 92..119
e-value: 0.00181154
score: 33.7642
NoneNo IPR availableSUPERFAMILY57196EGF/Laminincoord: 85..119
NoneNo IPR availableSUPERFAMILY57196EGF/Laminincoord: 160..201
NoneNo IPR availableSUPERFAMILY57196EGF/Laminincoord: 42..84
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 69..80
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 69..80
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 221..232
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 107..118
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 183..194
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 145..156
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 145..156
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 107..118
IPR013032EGF-like, conserved sitePROSITEPS01186EGF_2coord: 221..232
IPR013032EGF-like, conserved sitePROSITEPS00022EGF_1coord: 183..194
IPR009030Growth factor receptor cysteine-rich domainSUPERFAMILY57184Growth factor receptor domaincoord: 108..233

Blast
[Close]
BLAST of TCONS_00018183-protein vs. Swiss-Prot (Human)
Match: DLL1 (Delta-like protein 1 OS=Homo sapiens GN=DLL1 PE=1 SV=2)

HSP 1 Score: 160.614 bits (405), Expect = 2.421e-45
Identity = 78/201 (38.81%), Postives = 105/201 (52.24%), Query Frame = 0 
Query:   34 KKGYEGKNCEIKTDRCKGVTCRNGGKCKTVGNTYKCECKKGYEGKNCEIKTDRCKGVTCQNGGKCKTVGNT-YKCECKKGYEGKNCEIKTDRCKGVTCRNGGRCKTVGNTYKCECKKGYEGKNCEIKTDRCKGAPCRNGGKCKTVGNTYKCECRKGYEGQHCEIENDRCRGIVCQNGGKCKTVGDSFKCKCRRGFTGKHCE 233
            + GY G  CE+  D C    C+NGG C  + N+Y C C  G+ GK CE+    C    C NGG+C    +  Y C C  GY G NCE K D C    C NG +C  +G+ Y C C+ G+ G++C+   D C  +PC NGG C+   N + C C  GY G++C     RC    C NG  C   G  + C+C RG+ G +C+
Sbjct:  317 RPGYTGATCELGIDECDPSPCKNGGSCTDLENSYSCTCPPGFYGKICELSAMTCADGPCFNGGRCSDSPDGGYSCRCPVGYSGFNCEKKIDYCSSSPCSNGAKCVDLGDAYLCRCQAGFSGRHCDDNVDDCASSPCANGGTCRDGVNDFSCTCPPGYTGRNCSAPVSRCEHAPCHNGATCHERGHRYVCECARGYGGPNCQ 517

HSP 2 Score: 136.346 bits (342), Expect = 9.191e-37
Identity = 67/164 (40.85%), Postives = 86/164 (52.44%), Query Frame = 0 
Query:   34 KKGYEGKNCEIKTDRCKGVTCRNGGKCKTVGNT-YKCECKKGYEGKNCEIKTDRCKGVTCQNGGKCKTVGNTYKCECKKGYEGKNCEIKTDRCKGVTCRNGGRCKTVGNTYKCECKKGYEGKNCEIKTDRCKGAPCRNGGKCKTVGNTYKCECRKGYEGQHCEI 196
              G+ GK CE+    C    C NGG+C    +  Y C C  GY G NCE K D C    C NG KC  +G+ Y C C+ G+ G++C+   D C    C NGG C+   N + C C  GY G+NC     RC+ APC NG  C   G+ Y CEC +GY G +C+ 
Sbjct:  355 PPGFYGKICELSAMTCADGPCFNGGRCSDSPDGGYSCRCPVGYSGFNCEKKIDYCSSSPCSNGAKCVDLGDAYLCRCQAGFSGRHCDDNVDDCASSPCANGGTCRDGVNDFSCTCPPGYTGRNCSAPVSRCEHAPCHNGATCHERGHRYVCECARGYGGPNCQF 518

HSP 3 Score: 133.65 bits (335), Expect = 1.000e-35
Identity = 73/206 (35.44%), Postives = 108/206 (52.43%), Query Frame = 0 
Query:   34 KKGYEGKNCE--IKTDRCKGVTCRNGGKCKTVGNTYKCECKKGYEGKNCEIKTDRCKGV-TCQNGGKCKTVGN-TYKCECKKGYEGKNCEIKTDRCKGVTCRNGGRCKTVGNTYKCECKKGYEGKNCEIKTDRCKGAPCRNGGKCK-TVGNTYKCECRKGYEGQHCEIENDRCRGIVCQNGGKCKTVGDSFKCKCRRGFTGKHCEN 234
            + G++G+ C+  I+   C   TC+           ++C C++G+ G  C    + C     C+NG  C   G  +Y C C+ GY G  CE+  D C    C+NGG C  + N+Y C C  G+ GK CE+    C   PC NGG+C  +    Y C C  GY G +CE + D C    C NG KC  +GD++ C+C+ GF+G+HC++
Sbjct:  246 RVGWQGRYCDECIRYPGCLHGTCQQ---------PWQCNCQEGWGGLFCNQDLNYCTHHKPCKNGATCTNTGQGSYTCSCRPGYTGATCELGIDECDPSPCKNGGSCTDLENSYSCTCPPGFYGKICELSAMTCADGPCFNGGRCSDSPDGGYSCRCPVGYSGFNCEKKIDYCSSSPCSNGAKCVDLGDAYLCRCQAGFSGRHCDD 442

HSP 4 Score: 100.908 bits (250), Expect = 2.388e-24
Identity = 58/173 (33.53%), Postives = 90/173 (52.02%), Query Frame = 0 
Query:   68 KCECKKGYEGKNCE--IKTDRCKGVTCQNGGKCKTVGNTYKCECKKGYEGKNCEIKTDRCKGV-TCRNGGRCKTVGN-TYKCECKKGYEGKNCEIKTDRCKGAPCRNGGKCKTVGNTYKCECRKGYEGQHCEIENDRCRGIVCQNGGKCKTVGDS-FKCKCRRGFTGKHCENR 235
            +C+C+ G++G+ C+  I+   C   TCQ           ++C C++G+ G  C    + C     C+NG  C   G  +Y C C+ GY G  CE+  D C  +PC+NGG C  + N+Y C C  G+ G+ CE+    C    C NGG+C    D  + C+C  G++G +CE +
Sbjct:  242 ECKCRVGWQGRYCDECIRYPGCLHGTCQQ---------PWQCNCQEGWGGLFCNQDLNYCTHHKPCKNGATCTNTGQGSYTCSCRPGYTGATCELGIDECDPSPCKNGGSCTDLENSYSCTCPPGFYGKICELSAMTCADGPCFNGGRCSDSPDGGYSCRCPVGYSGFNCEKK 405
The following BLAST results are available for this feature:
BLAST of TCONS_00018183-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DLL12.421e-4538.81Delta-like protein 1 OS=Homo sapiens GN=DLL1 PE=1 ... [more]
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