TCONS_00018099-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00018099-protein
Unique Name	TCONS_00018099-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	292

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00018099-protein ID=TCONS_00018099-protein|Name=TCONS_00018099-protein|organism=Clytia hemisphaerica|type=polypeptide|length=292bp
MVEGCEEVKLPNFYVSIILESLASFLLVFIGGSVYVKYERPYNVSNVYEI
AVVFGGMLTVLSQCLKDVSKAHINPIITLASTLTKRISLLRALCYIVFQF
AGALAGVYALDAMVPKAAARAVGMTVLSADTTLLKGLVFEMIFSFIYTWI
HFASRNSRDTFKGFSGPLAIGIFYALSHIILVEHTGCSLNPARSLAPAIY
ENNFNELWVFIIGPFLAGALSGLVHDLIIHRSKGHPYPRARSCSITCCKP
SREEVIMTNRNAVEKVDNKVLTGHSSGPDIIIYPPLGQEKLV

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_010150	XLOC_010150	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00018099	TCONS_00018099	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000425	MIP
IPR023271	Aquaporin-like

Vocabulary: **Molecular Function**
Term	Definition
GO:0005215	transporter activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0006810	transport

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006810	transport
cellular_component	GO:0016020	membrane
molecular_function	GO:0005215	transporter activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000425	Major intrinsic protein	PRINTS	PR00783	MINTRINSICP	coord: 171..193 score: 37.09 coord: 15..34 score: 27.68 coord: 54..78 score: 36.62 coord: 139..157 score: 17.85 coord: 91..110 score: 36.15 coord: 208..228 score: 33.2
IPR000425	Major intrinsic protein	PFAM	PF00230	MIP	coord: 11..225 e-value: 1.7E-48 score: 165.2
IPR023271	Aquaporin-like	GENE3D	1.20.1080.10		coord: 3..246 e-value: 2.7E-56 score: 190.0
IPR023271	Aquaporin-like	SUPERFAMILY	81338	Aquaporin-like	coord: 7..238

Blast

[Close]

BLAST of TCONS_00018099-protein vs. Swiss-Prot (Human)
Match: AQP1 (Aquaporin-1 OS=Homo sapiens GN=AQP1 PE=1 SV=3)

HSP 1 Score: 135.576 bits (340), Expect = 3.069e-38
Identity = 78/230 (33.91%), Postives = 127/230 (55.22%), Query Frame = 0

Query:    5 CEEVKLPNFYVSIILESLASFLLVFI--GGSVYVKYERPYNVSNVYE---IAVVFGGMLTVLSQCLKDVSKAHINPIITLASTLTKRISLLRALCYIVFQFAGALAGVYALDAMVPKAAARAVGMTVLSADTTLLKGLVFEMIFSFIYTWIHFASRNSRDTFKGFSGPLAIGIFYALSHIILVEHTGCSLNPARSLAPAIYENNFNELWVFIIGPFLAGALSGLVHDLII 229
              E K   F+ +++ E LA+ L VFI  G ++  KY    N + V +   +++ FG  +  L+Q +  +S AH+NP +TL   L+ +IS+ RAL YI+ Q  GA+     L  +       ++G   L+      +GL  E+I +        A+ + R    G S PLAIG+  AL H++ +++TGC +NPARS   A+  +NF+  W+F +GPF+ GAL+ L++D I+
Sbjct:    2 ASEFKKKLFWRAVVAEFLATTLFVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSSLTGNSLGRNDLADGVNSGQGLGIEIIGTLQLVLCVLATTDRRRRDLGGSAPLAIGLSVALGHLLAIDYTGCGINPARSFGSAVITHNFSNHWIFWVGPFIGGALAVLIYDFIL 231

The following BLAST results are available for this feature:

BLAST of TCONS_00018099-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00018099-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
AQP1	3.069e-38	33.91	Aquaporin-1 OS=Homo sapiens GN=AQP1 PE=1 SV=3	[more]

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TCONS_00018099-protein (polypeptide) - C. hemisphaerica