TCONS_00018088-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00018088-protein
Unique NameTCONS_00018088-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1798

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00018088-protein ID=TCONS_00018088-protein|Name=TCONS_00018088-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1798bp
ESKTRIITNYIINFRENPMDENYNAIQAKFSASLLWFLCRISEKEECNAP
QEITNPFHVASTGETTVCPEVVDYLTQGVMYFRVSSFIFDRDFTSFWDLL
HYFSKNGIYVIGGDSDEPVTEDDLTKKSPFNLNCHLSLMDAILNSYANHT
ATIQDYINSVKKISSFNASREMPFDLESSILLWLNKMNSHNTLHHLRKKS
VARDPDTSKIRIRKDQLVEAKILPQQKSLMQALRNGVSLLSLVLYYFGDA
LNVEDIKFSNPLSDEDRLSNIELFRSLCARHICTSVFALRIDDFFVACDD
MKPNFIALLCEILSSCEKARNEPKPKINTTTNRDVAMQPTMVNATEPKAK
HKMAHQPLLSKRSKKQLAIFHDDEKSKIQLDDFEMKESYTIGETHSTKGK
EDVNPPNTSLAWNEPVKKEKISLAFKPPDSNTNQRPTIKGMQTRSAEQAT
RSLEELSKSKHSTPSFTSTSQPNSNIRLAWDDEHQEISQSRQTTEPVLSP
THSSLKSVYQLTCEPDLSSIEIPKETTPPAFQEQTNSLLPIHPHEQDEDA
LSTIMETSEPGTPLIASVDSNLTPESSPLTQTSTDFVFENSPSSARKFIE
IDAGKADQSIKTTDSINKQIEPFEDTGITPRHEKQSGLPQMKSPFSVFRN
SRENDVSGLSIPKQDDVAASYTVQESCTVESAIAHGLPVIDSDRSGEQGR
QLDYIDLNSSQEISGMEIEQKEHSKVNTSDKFELRESSEVLDNFLHRTSV
DIDKNQNKHIEHVRQTMEKERTSISQTIQFDQRVSSIDKRFMSQSYDEEM
RKRYTGQAKPYQSLDISRDKTYTKSLKEHPYQINNANLNSSKLLNMDSNN
QNITSSSADVNQSVNKSYSISQSGPTNQYTDQSSFTNQLPNQSDLRNSYS
QPHSINTRQNINNRFLSQSFDVGQRTNISDFIPALHKDTPITNTDIVDSS
KKASLLNQVSFQHWPFSPKSDQGSNGVQFIEDKNGEKRFIEQLHVLRNPS
TQHSNGGVLTSWMDGGTQNKERPSLEEREERLRKIQEKRLQSMGSTQITT
WSNLSRIQQDKEQQDALNQNEGDAPLSSRLAALRMKLEEKRRQFEEEKKT
KLKEWNEERAQALQSAFFVSMDEKENKDPVNADASGTTTRQESTHGKKSD
ITPQDYIRQKQLEKQNSPGQQTEKKSWFFDINGQQQDVGEIKHTPNISGE
GNAPTAPNPPLSSTIPDEQPSIQSTDQKVASIRTSYQGVEPSFSQVNQSA
AHINRSSYNGTEANFKLESKPTHPTNRASYHGPESSYHKETQNLTNANRS
SYTEGMTPTLSALQRLQQTTNELSTHISQNSSSASEQRQQTEQNSNQKMD
TIEPTTTSASTTMEPPNIPSQDETPSDIQNTHISNIPESQPLIQQEPKTE
DPVIEQSQNEIPLPQSEIMVMPQQTETETLNVDPVRPIPFLKEPVSSEIV
NDIANDVGNLQIQDAINEIASEQPEQSSQQVEQGTGEEEHGSSSPTKNSA
LVFTFGGEEETESAGITPEQIKKRERFLQKRQKQIEEKKLKREAELEKKR
KKDEEALQEKLRMDEEKERVKKEKIRQRAQSAENHERAAHHQDNQRQYSA
SAFTVSMNSTSSSPSHQLRRPPSSEHLRRLQSGSPSHHATNGDGTPDESK
YSEYTGPSAYQKPSGKSNRKIIQNAITYCCLSGGVNRDAKDRCLEAIEKS
EAHHFVVLFRDPMKFRGVYEYYPENDLVTKIYGTGPKSITSKMTEKFFRY
NSGGKAFNGMLMKDLSIQCDGFTIKKELWEKKPTGGTPSKTPLRKKVR
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010146XLOC_010146Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00018088TCONS_00018088Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014797CKK_domain
IPR022613CAMSAP_CH
IPR031372CAMSAP_CC1
IPR001715CH-domain
IPR011033PRC_barrel-like
Vocabulary: Molecular Function
TermDefinition
GO:0008017microtubule binding
GO:0005516calmodulin binding
GO:0030507spectrin binding
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0031175neuron projection development
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0031175 neuron projection development
molecular_function GO:0005516 calmodulin binding
molecular_function GO:0008017 microtubule binding
molecular_function GO:0005515 protein binding
molecular_function GO:0030507 spectrin binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1528..1573
NoneNo IPR availableCOILSCoilCoilcoord: 1077..1115
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 846..902
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 391..474
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 999..1030
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1534..1667
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1119..1154
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1472..1499
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1191..1236
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1265..1291
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1319..1413
IPR014797CKK domainSMARTSM01051CAMSAP_CKK_2coord: 1655..1782
e-value: 1.3E-49
score: 180.8
IPR014797CKK domainPFAMPF08683CAMSAP_CKKcoord: 1658..1774
e-value: 3.7E-41
score: 139.9
IPR014797CKK domainPROSITEPS51508CKKcoord: 1656..1790
score: 52.276
IPR022613Calmodulin-regulated spectrin-associated protein, CH domainPFAMPF11971CAMSAP_CHcoord: 223..296
e-value: 9.8E-15
score: 54.1
IPR031372CAMSAP, spectrin and Ca2+/calmodulin-binding regionPFAMPF17095CAMSAP_CC1coord: 1070..1117
e-value: 4.4E-7
score: 29.5
IPR001715Calponin homology domainGENE3D1.10.418.10coord: 148..468
e-value: 2.6E-7
score: 29.9
IPR001715Calponin homology domainSUPERFAMILY47576Calponin-homology domain, CH-domaincoord: 224..296
IPR011033PRC-barrel-likeSUPERFAMILY50346PRC-barrel domaincoord: 1652..1783

Blast
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BLAST of TCONS_00018088-protein vs. Swiss-Prot (Human)
Match: CAMP1 (Calmodulin-regulated spectrin-associated protein 1 OS=Homo sapiens GN=CAMSAP1 PE=1 SV=2)

HSP 1 Score: 162.54 bits (410), Expect = 8.272e-40
Identity = 90/306 (29.41%), Postives = 165/306 (53.92%), Query Frame = 0 
Query:   18 PMDENYNAIQAKFSASLLWFLCRISEKEECNAPQEITNPFHVASTGETTVCPEVVDYLTQGVMYFRVSSFIFDRD----FTSFWDLLHYFSKNGIYVIGGDSDEPVTEDDLTKKSPFNLNCHLSLMDAILNSYANHTATIQDYINSVKKISSFNASREMPFDLESSILLWLNKMN---SHNTLHHLR-KKSVARDPDTSKIRIRKDQLV--EAKILPQQKSLMQALRNGVSLLSLVLYYFGDALNVEDIKFSNPLSDEDRLSNIELFRSLCARHICTSVFALRIDDFFVACDDMKPNFIALLCEIL 313
            P+D  Y+A +AK +A+L W   +   ++  N P+++ +PF+V    +  + P V+  L    +Y RV S I   D          ++   S+ GIYV+  D D PVTE DL++ +P  ++ H++++DA++ +Y     +I+  + SVK+ S+F+AS+E+P+DLE +++ W+NK+N      T   ++ K+ +   P   K+R R++ L   ++   P  + LM+   +G +LL+++ YY  + + ++DI      S  D L NI L R     ++    F L ++D   A   +KPN +  + E+ 
Sbjct:   28 PLD-RYDAARAKIAANLQWICAKAYGRD--NIPEDLRDPFYVDQYEQEHIKPPVIKLLLSSELYCRVCSLILKGDQVAALQGHQSVIQALSRKGIYVMESD-DTPVTESDLSR-APIKMSAHMAMVDALMMAYTVEMISIEKVVASVKRFSTFSASKELPYDLEDAMVFWINKVNLKMREITEKEVKLKQQLLESPAHQKVRYRREHLSARQSPYFPLLEDLMRDGSDGAALLAVIHYYCPEQMKLDDICLKEVTSMADSLYNIRLLREFSNEYL-NKCFYLTLEDMLYAPLVLKPNVMVFIAELF 327

HSP 2 Score: 155.221 bits (391), Expect = 1.273e-37
Identity = 110/343 (32.07%), Postives = 176/343 (51.31%), Query Frame = 0 
Query: 1503 FTFGGEEETESAGITPEQIKKRERFLQKRQKQIEEKKLKR---EAELEKKR-KKDEEALQEKLRMDEEKER---VKKEKIRQRAQSAENHERAAHHQDNQRQ------YSASAFTVSMNSTSSSPSHQLRR--------------PPSSEHLRRLQSGSPSHHATNGDGTPDESK---------------------YSEYTGPSAYQKPSGKSNRKIIQNAITYCCLSGGVNRDAKDRCLEAIEKSEAHHFVVLFRDP-MKFRGVYEYYPENDLVTKIYGTGPKSITSKMTEKFFRYNSGGKAFNGMLMKDLSIQCDGFTIKKELWE-KKPTGGTPSKTPLRK 1795
            F F  E++ E      E  KKR  FL K+Q++ EE ++++   EAE+E KR +   +A ++++R +EEK R   +K+E +R++ Q     +     +   ++      +   + + S    SS+P +  R                P S H      G+PS    + +  P  S+                      +EYTGP  +++PS KSN+ II NAI++CCL+G VN   K+  LE +EK +A+H+++LFRD   +FR +Y YYP+ + + K+ GTGPK+IT KM +K ++Y+S  K FN +  K +S+  D  TI   LW+ K+P    P K   RK
Sbjct: 1271 FFFKDEQKAED-----ELAKKRAAFLLKQQRKAEEARVRKQQLEAEVELKRDEARRKAEEDRVRKEEEKARRELIKQEYLRRKQQQILEEQGLGKPKSKPKKPRPKSVHREESCSDSGTKCSSTPDNLSRTQSGSSLSLASAATTEPESVH----SGGTPSQRVESMEALPILSRNPSRSTDRDWETASAASSLASVAEYTGPKLFKEPSSKSNKPIIHNAISHCCLAGKVNEPHKNSILEELEKCDANHYIILFRDAGCQFRALYCYYPDTEEIYKLTGTGPKNITKKMIDKLYKYSSDRKQFNLIPAKTMSVSVDALTIHNHLWQPKRP--AVPKKAQTRK 1602
The following BLAST results are available for this feature:
BLAST of TCONS_00018088-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CAMP18.272e-4029.41Calmodulin-regulated spectrin-associated protein 1... [more]
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