TCONS_00018066-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00018066-protein
Unique NameTCONS_00018066-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1745

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00018066-protein ID=TCONS_00018066-protein|Name=TCONS_00018066-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1745bp
MELKIFLFWCIYLVDILVDCAITTTSKELDIVTNTGINVNYGRATKLTDQ
HLKIKYEKGSICKVSVLKVNPFSSRIGAFVPSVFPCDFAPNSIYYQHFGS
MSRSTEKIKLQIRVDTEHDTYLKSFEFTVNIGLYEPFEILKRVENLVVDE
IGGLSEPFSENVIGLRFDPYKHTCRVRFLSTQGGPPYYGSLVNASDPDGF
GQVSKFKDISCHRFLNGNLRYAHQRSRRTSNRDYLPFVIELYDKFTSLMD
KREFIQIPVRIRRAPENQPPIVNYNHASYSLQVDQLVLTALTPAVLRVED
RETDSDSIVFNITQKYDENDGYLVHTDDPSSPVRTFYQKDIRDLKIAYKA
SDKLSTTQRMQPIYMEARDSYGAASSKFYIIIVIKPMNSFAPRVIRNEVL
TMFEGQSRLVSRDVLSVRDPDNEAEVVIRVSDGLKNGRLEMYGKSVTKMS
VADIAGKRIRYVHDGSDTTSDNIVFHISDGKHTVQVLFVVLIVPRDDQPP
QLTYNTGLNVKEGETKMIGQFLLSATDIDSDNTKITYKIIKAPSAGILVY
RQIDTPNDFARRERQWRLTNSSYERIVTEFTQVDVILGRIFYRHSGEEIF
QDMFTFRLSDNTNVPNQSGIKTFIIVIDPVDDLPPTPYPGCPFTLNTAEN
QPGIFTKKSLRYVDGDSSDEEITYRITSQPYFENSGTNAGKLFISRKGQS
EIADSFTQKYINHFKVKYVPNTLLQSIIQSSKVIFKYDVTDSAGNLRANQ
NFSIDLRAVKNKPPVYQTNSVLRVKSEGSQVITTAQLNAQDDDSELKDLV
FIVKKLPLYGVLTNSGYRQSVGSSISLIDIRESRVTYLHGGNDATDDVIK
FMLTDGINMVGVQLRINIIHGQSTLSKESRKPRIFENRLNVEENGIIEIG
SKTFGLPTFVEDDQIDHQLTFKVDPPPKHGQIERKGASTNIFTLEDIASG
QIAYHHTDGEVGTQKLQDLINLNIPQNDQDIFIGGQLYSGLTLTVDIAPV
NSQPPKIDGPLLIEVVESKKSILKINISDSDTSPENINCNVTELPLFGFI
ENLTPLDGSEIQRPNIPVEKFRVSDLNQGRVSYVQSKHNKIEPDMDSFNL
RCFDGNNTSSEVKVHVSIAPINDEPPVLFIQSQIVCIEDDLIIFDLSKIN
PFDRDRPTDELVFFVTKQPINGELLLQNNSALNPATDFGYEVLSGDTDIT
LIYQHKGTETTKDQFELSVFDGVHTTEGVVNITIIPMDDEQPRLVVNTGL
RIDRGQSKTITTSNLKAQDLDSEDSQLMYIVMMESISGKLQKLNTSQLYT
DLVKGNNFTQTDIDKKRIRYTHLNMKSEDRDLIRLDVTDGFNRLINQIFN
IIIXPEDNIIPVVVNKGLRLLENSRAILTTDVLSASDINTPDENLQFIVT
RLPLKGFLEHSDRSGIPLTRFTQLDLAANKISYLHTSLDEIKADNFEFEV
TDGQNKVFRTFRIHIDSVDNKLPVLQKSIVYTGQGQEKIITPFELNAYDN
DTKLNNVIFQIHRPPRHGVIYLDGITRTFRFTQQDITENRLSYQHDGSMG
TIDSFTVAAGDGVNEGYYLKGSKRIQKRPITVQIEITAIDKNAPVIVTNK
LITSLRVRRKKIFTKLSINVLEAVDSHSESNSIIFNITGHPKEGKLINVK
NKGVIITQFSQDDVNNRIIEYLLNGSSSATNDIFFFDVLDGNGNALRGQN
LKLKWSRVCIHQEQFTVQETDLKADLXTCLYSPETIYCSRNRFEG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010126XLOC_010126Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00018066TCONS_00018066Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013783Ig-like_fold
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.60.500.10coord: 1142..1242
e-value: 0.0024
score: 17.5
NoneNo IPR availableGENE3D2.60.120.640coord: 644..776
e-value: 0.0063
score: 16.1
coord: 1484..1606
e-value: 0.0095
score: 15.6
coord: 401..504
e-value: 0.028
score: 14.1
coord: 1369..1483
e-value: 0.13
score: 11.9
NoneNo IPR availablePFAMPF16184Cadherin_3coord: 483..610
e-value: 1.1E-20
score: 73.6
coord: 1577..1691
e-value: 3.4E-16
score: 59.2
coord: 375..480
e-value: 7.3E-24
score: 83.8
coord: 878..964
e-value: 1.6E-9
score: 37.6
coord: 265..359
e-value: 1.2E-9
score: 38.1
coord: 992..1105
e-value: 9.9E-13
score: 48.0
coord: 749..856
e-value: 1.3E-17
score: 63.7
coord: 1225..1340
e-value: 5.9E-25
score: 87.3
coord: 620..722
e-value: 7.9E-10
score: 38.6
coord: 1346..1453
e-value: 1.3E-24
score: 86.3
coord: 1459..1562
e-value: 5.9E-21
score: 74.5
coord: 1109..1222
e-value: 1.7E-14
score: 53.7
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 992..1120
e-value: 0.013
score: 15.6
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 505..632
e-value: 0.0059
score: 16.8

Blast
BLAST of TCONS_00018066-protein vs. Swiss-Prot (Human)
Match: FREM2 (FRAS1-related extracellular matrix protein 2 OS=Homo sapiens GN=FREM2 PE=1 SV=2)

HSP 1 Score: 1057.74 bits (2734), Expect = 0.000e+0
Identity = 641/1737 (36.90%), Postives = 957/1737 (55.09%), Query Frame = 0
Query:   21 AITTTSKELDIVTNTGINVNYGRATKLTDQH-LKIKYEKGSICKVSVLKVNPFSSRIGAFVPSVFPCDFAPNSIYYQHFGSMSRSTEKIKLQIRVDTEHDTYLKSFEFTVNIGLYEPFEILKRVENLVVDEIGGLSEPFSENVIGLRFDPYKHTCRVRFLSTQGGPPYYGSLVNASD-PDGF--GQVSKFKDISCHRFLNGNLRYAHQRSRRTSNRDYLPFVIELYDKFTSLMD---KREFIQIPVRIRRAPENQPPIVNYNHASYSLQVDQLVLTALTPAVLRVEDRETDSDSIVFNITQKYDENDGYLVHTDDPSSPVRTFYQKDIRDLKIAYKASDKLSTTQRMQPIYMEARDSYGAASSKFYIIIVIKPMNSFAPRVIRNEVLTMFEGQSRLVSRDV------LSVRDPDNEAEVVIRVSDGLKNGRLEMYGKSV-----TKMSVADIAGKRIRYVHDGSD-TTSDNIVFHISDG--KHTVQVLFVVLIVPRDDQPPQLTYNTGLNVKEGETKMIGQFLLSATDIDSDNTKITYKIIKAP--SAGILVYRQIDTPNDFARRERQ-WRLTNSSYERIVTEFTQVDVILGRIFYRHSGEEI---FQDMFTFRLSDNTNVPNQSGIKTFIIVIDPVDDLPPTPYPGCPFTLNTAENQPGIFTKKSLRYVDGDSSDEEITYRITSQPYF--ENSGTNAGKLFISRKGQSEIADSFTQKYINHFKVKYVPNTLLQSIIQSSKVI-FKYDVTDSAGNLRANQNFSIDLRAVKNKPPVYQTNSVLRVKSEGSQVITTAQLNAQDDDSELKDLVFIVKKLPLYGVLTNSGYRQSVGSSISLIDIRESRVTYLHGGNDATDDVIKFMLTDGINMVGVQLRINIIHGQSTLSKESRKPRIFENRLNVEENGIIEIGSKTFGLPTFVEDDQIDHQLTFKVDPPPKHGQIERKGASTNIFTLEDIASGQIAYHHTDGEVGTQKLQDLINLNIPQNDQDIFIGGQLYSGLTLTVDIAPVNSQPPKI-DGPLLIEVVESKKSIL---KINISDSDTSPENINCNVTELPLFGFIENLTPLDGSEIQRPNIPVEKFRVSDLNQGRVSYVQSKHNKIEPDMDSFNLRCFDGNNTSSEVKVHVSIAPINDEPPVLFIQSQIVCIEDDLIIFDLSKINPFDRDRPTDELVFFVTKQPINGELLLQ--NNSALNPATDFGYEVLSGDTDITLIYQHKGTETTKDQFELSVFDGVHTTEGVVNITIIPMDDEQPRLVVNTGLRIDRGQSKTITTSNLKAQDLDSEDSQLMYIVMMESISGKLQKLNTSQLYTDLVKGNNFTQTDIDKKRIRYTHLNMKSEDRDLIRLDVTDGFNRLINQIFNIIIXPEDNIIPVVVNKGLRLLENSRAILTTDVLSASDINTPDENLQFIVTRLPLKGFLEHSDRSGIPLTRFTQLDLAANKISYLHTSLDEIKADNFEFEVTDGQNKVFRTFRIHIDSVDNKLPVLQKSIVYTGQGQEKIITPFELNAYDNDTKLNNVIFQIHRPPRHGVIYLDGITRTFRFTQQDITENRLSYQHDGSMGTIDSFTVAAGDGVNEGYYLKGSKRIQ-KRPITVQIEITAIDKNAPVIVTNKLITSLR-VRRKKIFTKLSINVLEAVDSHSESNSIIFNITGHPKEGKLINVKNKGVIITQFSQDDVNNRIIEYLLNGSSSATNDIFFFDVLDGNGNALRGQNLKLKWSRVCIHQEQFTVQE 1719
            A    ++E  ++ N G+ V +GR   L   H L ++ + G  C VSVL  +  + R G   P  FPCDF P  + Y H G+ S S ++++LQ+R D      +      V + ++   E++ R   LVV+E+ G S       +   F P    CRV  LS  G  P YG L++    P G   G   +   + C  F    +RY H  + R+ NRD++P V+EL  +   +     KRE  Q+ VRIR   EN  P  ++  A   ++VDQ VLTALTP +L  ED E+ SD ++FN+T  +    GYLV TDD S P+ +F Q+D+R LKIAY+   + S  +R+  + +E  D  GAAS  F  ++V+KPMN+ AP V RN  L ++EGQSR ++         L + D D+   V + V  GL++G L + G S         +VA++A  ++ Y HD  D + SDN+V  + DG  +H VQ LF + +VP DDQPP L  NTGL + EGET  I    LSATD+DSD++ + + ++++P  + G L+ RQ   P++     R  WR   + YER VTE+ Q D+  GR+FYRHSG        D FTFR+ DN + PNQSG++ F+I I PVD LPP    GCP  +   E+Q     KK LRY D D+ D E+ Y +T  P    EN         +     S +   FTQ  INH K+ Y P    Q +  +++V  F++ V D AGN+ A   F++ L  V N+PP    N+   ++ +G  +++  +L+  D D+++  + F + + P +G +  SG    VG    L DI++ RV+Y H G+ +  D     ++D  ++V + LR+N+      +   S      E+ L+V ENG  EI   T  +     ++  D  LTF ++ PP +G+I   G     FT  DI  G + Y HT GE+G     D  NL++    Q+  IGG    G+T+ V I PV+SQ P+I  G  LI V+E  KS++    I+  D D+  ++I C +   P  G++EN++P  GSE  R  I +  F + DL QG ++YVQS H  +EP  D F  RC DG N S      + I P NDE P +F++ + + +E   ++ D   +N  D D P D+L F +T+ P +G ++ Q  N + L  +      + S     ++IY+H  +ET +D F + + DG H+ E  V I +IP+DDE PR+ +N GL I+ G +K I    L A DLDSED  L+YI+      G LQ+   +  + ++  G NFTQ ++D+  I+Y HL  +   RDLI+ DVTDG N LI++ F + I   D + P V++KG+ L E  +  LTTD+LS SD+N+PDENL F +TR P++G LE +D+ G+ +T FTQL LA NKI Y+HT+ DE+K D+FEF+VTDG+N VFRTFRI I  VDNK PV+    +   + + K+ITPFEL   D DT    + F I + P HG +  +       FT+QD+ EN +SY+HDG+  + DSF+    DG +  +Y+      + +RP  ++I++ A+D + P I  NK  ++LR +    +   ++  +L+  D  S   S+ F +T  P+ G L+N+      ITQF+Q D+++  I Y+L   ++AT+D+F+F V DG GN L  QN +L W+ +   +E + V E
Sbjct:   63 AAGVPAEEAIVLANRGLRVPFGREVWLDPLHDLVLQVQPGDRCAVSVLDNDALAQRPGRLSPKRFPCDFGPGEVRYSHLGARSPSRDRVRLQLRYDAPGGAVVLPLVLEVEV-VFTQLEVVTRNLPLVVEELLGTSNALDARSLEFAFQPETEECRVGILSGLGALPRYGELLHYPQVPGGAREGGAPETLLMDCKAFQELGVRYRHTAASRSPNRDWIPMVVELRSRGAPVGSPALKREHFQVLVRIRGGAENTAPKPSFV-AMMMMEVDQFVLTALTPDMLAAEDAESPSDLLIFNLTSPFQPGQGYLVSTDDRSLPLSSFTQRDLRLLKIAYQPPSEDSDQERLFELELEVVDLEGAASDPFAFMVVVKPMNTMAPVVTRNTGLILYEGQSRPLTGPAGSGPQNLVISDEDDLEAVRLEVVAGLRHGHLVILGASSGSSAPKSFTVAELAAGQVVYQHDDRDGSLSDNLVLRMVDGGGRHQVQFLFPITLVPVDDQPPVLNANTGLTLAEGETVPILPLSLSATDMDSDDSLLLF-VLESPFLTTGHLLLRQTHPPHEKQELLRGLWRKEGAFYERTVTEWQQQDITEGRLFYRHSGPHSPGPVTDQFTFRVQDNHDPPNQSGLQRFVIRIHPVDRLPPELGSGCPLRMVVQESQLTPLRKKWLRYTDLDTDDRELRYTVTQSPTDTDENHLPAPLGTLVLTDNPSVVVTHFTQAQINHHKIAYRPPG--QELGVATRVAQFQFQVEDRAGNV-APGTFTLYLHPVDNQPPEI-LNTGFTIQEKGHHILSETELHVNDVDTDVAHISFTLTQAPKHGHMRVSGQILHVGGLFHLEDIKQGRVSYAHNGDKSLTDSCSLEVSDRHHVVPITLRVNVRPVDDEVPILSHPTGTLESYLDVLENGATEI---TANVIKGTNEETDDLMLTFLLEDPPLYGEILVNGIPAEQFTQRDILEGSVVYTHTSGEIGLLPKADSFNLSLSDMSQEWRIGGNTIQGVTIWVTILPVDSQAPEIFVGEQLI-VMEGDKSVITSVHISAEDVDSLNDDILCTIVIQPTSGYVENISPAPGSEKSRAGIAISAFNLKDLRQGHINYVQSVHKGVEPVEDRFVFRCSDGINFSERQFFPIVIIPTNDEQPEMFMR-EFMVMEGMSLVIDTPILNAADADVPLDDLTFTITQFPTHGHIMNQLINGTVLVESFTLDQIIESS----SIIYEHDDSETQEDSFVIKLTDGKHSVEKTVLIIVIPVDDETPRMTINNGLEIEIGDTKIINNKILMATDLDSEDKSLVYIIRYGPGHGLLQRRKPTGAFENITLGMNFTQDEVDRNLIQYVHLGQEG-IRDLIKFDVTDGINPLIDRYFYVSIGSIDIVFPDVISKGVSLKEGGKVTLTTDLLSTSDLNSPDENLVFTITRAPMRGHLECTDQPGVSITSFTQLQLAGNKIYYIHTADDEVKMDSFEFQVTDGRNPVFRTFRISISDVDNKKPVVTIHKLVVSESENKLITPFELTVEDRDTPDKLLKFTITQVPIHGHLLFNNTRPVMVFTKQDLNENLISYKHDGTESSEDSFSFTVTDGTHTDFYVFPDTVFETRRPQVMKIQVLAVDNSVPQIAVNKGASTLRTLATGHLGFMITSKILKVEDRDSLHISLRFIVTEAPQHGYLLNLDKGNHSITQFTQADIDDMKICYVLREGANATSDMFYFAVEDGGGNKLTYQNFRLNWAWISFEKEYYLVNE 1782          
The following BLAST results are available for this feature:
BLAST of TCONS_00018066-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FREM20.000e+036.90FRAS1-related extracellular matrix protein 2 OS=Ho... [more]
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