TCONS_00018042-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00018042-protein
Unique NameTCONS_00018042-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length325

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00018042-protein ID=TCONS_00018042-protein|Name=TCONS_00018042-protein|organism=Clytia hemisphaerica|type=polypeptide|length=325bp
MLSRYRLFVHTQIFILHILEFLAQALYLSVDPYMRPYSRNMKEGTKMIGG
GVGRVVDSKNEEFPKGCLVVGPFGWSTHVVSNQGIIKMFRKIPEIENPSL
ALGGLGLTGMTAYFGLLNICEPKAGETVFVNAAAGATGSVVGQIAKIKGC
RVVGCAGSDAKVEYLKEIGFDGAFNYKTADLEKELKNLCPKGIDCFFDNV
GGKMYDTVLKQMNRHGRISLCGCISLYNENTDGFGNTKGENTVHPNSLSP
YVHFEAIPKELKIQGFIVTSYYDKGFMDAFTELSQWIKEGKIDAREHVVE
GFESMPKAFISLFHGENIGKIVVKV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010116XLOC_010116Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00018042TCONS_00018042Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020843PKS_ER
IPR013149ADH_C
IPR011032GroES-like
IPR016040NAD(P)-bd_dom
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0016491 oxidoreductase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020843Polyketide synthase, enoylreductase domainSMARTSM00829PKS_ER_names_modcoord: 23..323
e-value: 5.8E-5
score: -105.6
IPR013149Alcohol dehydrogenase, C-terminalPFAMPF00107ADH_zinc_Ncoord: 137..270
e-value: 2.4E-24
score: 85.6
NoneNo IPR availablePFAMPF16884ADH_N_2coord: 20..83
e-value: 1.4E-19
score: 69.9
NoneNo IPR availableGENE3D3.90.180.10coord: 253..325
e-value: 8.1E-8
score: 31.7
NoneNo IPR availableGENE3D3.90.180.10coord: 16..126
e-value: 2.7E-19
score: 69.0
NoneNo IPR availableGENE3D3.40.50.720coord: 127..252
e-value: 6.5E-27
score: 93.7
NoneNo IPR availableCDDcd08294leukotriene_B4_DH_likecoord: 20..325
e-value: 1.80757E-150
score: 428.22
IPR011032GroES-likeSUPERFAMILY50129GroES-likecoord: 20..121
IPR011032GroES-likeSUPERFAMILY50129GroES-likecoord: 281..324
IPR016040NAD(P)-binding domainSUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 102..237

Blast
[Close]
BLAST of TCONS_00018042-protein vs. Swiss-Prot (Human)
Match: PTGR1 (Prostaglandin reductase 1 OS=Homo sapiens GN=PTGR1 PE=1 SV=2)

HSP 1 Score: 290.041 bits (741), Expect = 4.178e-97
Identity = 145/307 (47.23%), Postives = 202/307 (65.80%), Query Frame = 0 
Query:   20 EFLAQALYLSVDPYMRPYSRNMKEGTKMIGGGVGRVVDSKNEEFPKGCLVVGPFGWSTHVVSN-QGIIKMFRKIPEIENPSLALGGLGLTGMTAYFGLLNICEPKAGETVFVNAAAGATGSVVGQIAKIKGCRVVGCAGSDAKVEYLKEIGFDGAFNYKTAD-LEKELKNLCPKGIDCFFDNVGGKMYDTVLKQMNRHGRISLCGCISLYNENTDGFGNTKGENTVHPNSLSPYVHFEAIPKELKIQGFIVTSYYDKGFMDAFTELSQWIKEGKIDAREHVVEGFESMPKAFISLFHGENIGKIVVK 324
            E L +AL+L+VDPYMR  ++ +KEG  M+G  V +VV+SKN   PKG +V+   GW+TH +S+ + + K+  + P+    SLALG +G+ G+TAYFGLL IC  K GETV VNAAAGA GSVVGQIAK+KGC+VVG  GSD KV YL+++GFD  FNYKT + LE+ LK   P G DC+FDNVGG+  +TV+ QM + GRI++CG IS YN           E  ++              +EL+++ F+V  +       A  +L +W+ EGKI  +E+++EGFE+MP AF+ +  G+N+GK +VK
Sbjct:   36 EVLLEALFLTVDPYMRVAAKRLKEGDTMMGQQVAKVVESKNVALPKGTIVLASPGWTTHSISDGKDLEKLLTEWPDTIPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAVGSDEKVAYLQKLGFDVVFNYKTVESLEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICGAISTYNRTGPLPPGPPPEIVIY--------------QELRMEAFVVYRWQGDARQKALKDLLKWVLEGKIQYKEYIIEGFENMPAAFMGMLKGDNLGKTIVK 328
The following BLAST results are available for this feature:
BLAST of TCONS_00018042-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PTGR14.178e-9747.23Prostaglandin reductase 1 OS=Homo sapiens GN=PTGR1... [more]
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