TCONS_00018019-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00018019-protein
Unique NameTCONS_00018019-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length131

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00018019-protein ID=TCONS_00018019-protein|Name=TCONS_00018019-protein|organism=Clytia hemisphaerica|type=polypeptide|length=131bp
MTKQFETVCAHLLHQCKNADVISDELIVALHNVFQSNVVVEAAKLVDEKK
IQSLMSESGRHIFKVKGSNEKWYMVSSSSFYCSCPSFTFQFLKKKSSYLC
KHVLATFLYKRDVTTVTNEELTLFLMSCFDS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010096XLOC_010096Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00018019TCONS_00018019Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007527Znf_SWIM
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007527Zinc finger, SWIM-typePFAMPF04434SWIMcoord: 66..110
e-value: 1.5E-7
score: 30.9
IPR007527Zinc finger, SWIM-typePROSITEPS50966ZF_SWIMcoord: 73..111
score: 10.559

Blast
[Close]
BLAST of TCONS_00018019-protein vs. Swiss-Prot (Human)
Match: ZSWM7 (Zinc finger SWIM domain-containing protein 7 OS=Homo sapiens GN=ZSWIM7 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.872e-19
Identity = 43/109 (39.45%), Postives = 67/109 (61.47%), Query Frame = 0 
Query:   22 ISDELIVALHNVFQSNVVVEAAKLVDEKKIQSLMSESGRHIFKVKGSNEKWYMVSSSSFYCSCPSFTFQFLKKKSSYLCKHVLATFLYKRDVT----TVTNEELTLFLM 126
            I DE +++L  +F S+   +A  LVD + I  + S SGR +++V GS+ K Y   +S  YCSCP+F F  L+K  S LCKH+LA +L +   T    +V++++LT  L+
Sbjct:   26 IPDEYLLSLKFLFGSSAT-QALDLVDRQSITLISSPSGRRVYQVLGSSSKTYTCLASCHYCSCPAFAFSVLRKSDSILCKHLLAVYLSQVMRTCQQLSVSDKQLTDILL 133
The following BLAST results are available for this feature:
BLAST of TCONS_00018019-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZSWM71.872e-1939.45Zinc finger SWIM domain-containing protein 7 OS=Ho... [more]
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