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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00018018-protein ID=TCONS_00018018-protein|Name=TCONS_00018018-protein|organism=Clytia hemisphaerica|type=polypeptide|length=654bp
MGLIDQIEFYTDWVNNEFRLSWKDHYVEDLIEDCSSGVYLALLINAIFDE
DIPILHDPPGTSYERQQNVQLCFPILREEGVNLTGVTIKGISEGDVDIII
SLCAAIKRRKGVGFRRWRSWDNPQESFLDVGSVSYRDDIYEQQQINDSCY
SNNLRKNASHSVFHNQTKRNNRAAFNEPLSNRDLIVRQSECTLLGNQSND
GEYVNKDVDWLYSKNNSLLDQSDQRNETNTHSDLLQGSNNRKVEFEQSAE
DVEGQTFYDEISFLANESQRNPFMDGHMMYQKEDIELFDWISKLLNVPVS
DYGSFADGIVIFQLLNKIIPNCVSSKVFYSLPKTERIQLLLETACHELYL
TTHLTALDVIQQRNFSHFRIFLTYLKSCVPSQSHRANIQKKFSLKELTTE
LDIKYLESSGYLKVDSTETSRSSSSPSKGPLKRDKPANVSSKSVQAKVNE
EKHQKAIPKKILPTIHTEYVSPTWSKILNEELQLRASRNESRLSSGYLTP
VPAPESGASSKRGNRENSQKTVKREEKIPASSFLEEPTISQVSPIYNPDT
ERITKYDNEIAAIFDGSDGDEESTLHSSVAAARTPTTEKSVGNINSKTSE
VTDTDARSKTSLVTAFTGNIKKKNKFLEITGVVRSMSRSPSGSRQASKLV
SEMF Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR001715 | CH-domain |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005515 |
protein binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR001715 | Calponin homology domain | SMART | SM00033 | ch_5 | coord: 6..109
e-value: 9.1E-4
score: 28.5
coord: 283..378
e-value: 0.85
score: 7.4 |
| IPR001715 | Calponin homology domain | PFAM | PF00307 | CH | coord: 284..373
e-value: 8.5E-5
score: 22.6
coord: 10..109
e-value: 1.9E-7
score: 31.1 |
| IPR001715 | Calponin homology domain | GENE3D | 1.10.418.10 | | coord: 280..396
e-value: 1.4E-5
score: 24.4 |
| IPR001715 | Calponin homology domain | GENE3D | 1.10.418.10 | | coord: 3..114
e-value: 4.7E-14
score: 51.8 |
| IPR001715 | Calponin homology domain | PROSITE | PS50021 | CH | coord: 4..111
score: 10.848 |
| IPR001715 | Calponin homology domain | PROSITE | PS50021 | CH | coord: 281..379
score: 10.378 |
| IPR001715 | Calponin homology domain | SUPERFAMILY | 47576 | Calponin-homology domain, CH-domain | coord: 7..123
coord: 279..366 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 416..455 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 635..654 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 221..240 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 490..534 |
Blast
The following BLAST results are available for this feature:
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