TCONS_00017941-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00017941-protein
Unique NameTCONS_00017941-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length739

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00017941-protein ID=TCONS_00017941-protein|Name=TCONS_00017941-protein|organism=Clytia hemisphaerica|type=polypeptide|length=739bp
MRSRITLVSNPFQSRWTKIVACSIMTIVVLVNLNILSWRSNSTTAVEIVQ
KVKCESATKTLALAELAAYYEKLLLEKGVNTNTIKDAIASKSGKIFNVFY
DTKVGADKKMIIETIPPAQNVPPPSPSTTPDTRFKGDTKIVFKELGSTNI
LKGVMMDWWFDFCMARESTEVIWHPLLPRVPQLSAITLTLADKDRTVGSN
LYRRMSGYLFVKETASFDFKLLSRDGAEVLVYDTGLTLSKINEINPKMRY
DSKKELFHSKLTKATMDAQDKVIPLSAMFQIESQNIELKKDQIYALEIIQ
GGKHFTKYSLQWKPFGSTFNRYTAIGQENLFHQDGKMVPGLLKQKYDPKP
IYSPNDSELRRLSFYKLPMLESRHLIDEAGLYCEEREKRYIKVDQLYQGY
NEYTDNVKSYPQEYFKFGLDNRYTLLDKATALQIADRTFKKLSRAHQSTL
ELVNVVYVMSNFGPLHNQTITSGPKYFFVELDVRNKSHGSKVFRASHFVE
PINEPTKDLCFVREWAPKGHGQVEINLMTAIKNQRAWLNYLILMLEELLA
EIKDTNVILNLIDYNSTDGDYEQILKASKLKFKYLNPIRDSKLSTKFSKV
KALNYGIKHVQNENSIVFILDLHLQLPLNIFDRIRKLTIQNRTAYNPTLM
KLGCGDHEQYTPKMKSTIWLDYGTGMMSMYKSDWMKVGCFNEKLFKDKWG
GEDWEVMDRMVGNGIQIIHQRLPRFYHIHHDRKHMWNKT
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010055XLOC_010055Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00017941TCONS_00017941Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029044Nucleotide-diphossugar_trans
IPR008428Chond_GalNAc
Vocabulary: Molecular Function
TermDefinition
GO:0008376acetylgalactosaminyltransferase activity
Vocabulary: Cellular Component
TermDefinition
GO:0032580Golgi cisterna membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0032580 Golgi cisterna membrane
molecular_function GO:0008376 acetylgalactosaminyltransferase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029044Nucleotide-diphospho-sugar transferasesGENE3D3.90.550.10coord: 531..739
e-value: 9.9E-17
score: 60.6
IPR029044Nucleotide-diphospho-sugar transferasesSUPERFAMILY53448Nucleotide-diphospho-sugar transferasescoord: 592..738
NoneNo IPR availableGENE3D3.90.182.10coord: 148..353
e-value: 3.2E-6
score: 26.5
IPR008428Chondroitin N-acetylgalactosaminyltransferasePFAMPF05679CHGNcoord: 481..733
e-value: 6.4E-17
score: 61.5

Blast
[Close]
BLAST of TCONS_00017941-protein vs. Swiss-Prot (Human)
Match: B4GN4 (N-acetyl-beta-glucosaminyl-glycoprotein 4-beta-N-acetylgalactosaminyltransferase 1 OS=Homo sapiens GN=B4GALNT4 PE=1 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 6.028e-42
Identity = 75/216 (34.72%), Postives = 127/216 (58.80%), Query Frame = 0 
Query:  523 VEINLMTAIKNQRAWLNYLILMLEELLAEIKDTNVILNLIDYNSTDGDYEQILKASKL-KFKYLNPIRDSKLSTKFSKVKALNYGIKHVQNENSIVFILDLHLQLPLNIFDRIRKLTIQNRTAYNPTLMKLGCGDHEQYTPKMKSTIWLDYGTGMMSMYKSDWMKVGCFNEKLFKDKWGGEDWEVMDRMVGNGIQIIHQRLPRFYHIHHDRKHMWN 737
            V ++ +  +KNQ  W+   +  +  L A   D+   + L+D+ S D D E+ L+A++L +++YL      + +  F +   L  G+  V++ +SIVF+ DLH+  P NI D IRK  ++ R A+ P +M+L CG     +P+     W   G G+  +YKSD+ +VG  N + F+D+WGGEDWE++DR++  G+++   RL  FYH +H ++ MW+
Sbjct:  822 VMVHFIVPVKNQARWVAQFLADMAALHARTGDSRFSVVLVDFESEDMDVERALRAARLPRYQYL------RRTGNFERSAGLQAGVDAVEDASSIVFLCDLHIHFPPNILDGIRKHCVEGRLAFAPVVMRLSCGS----SPRDPHGYWEVNGFGLFGIYKSDFDRVGGMNTEEFRDQWGGEDWELLDRVLQAGLEVERLRLRNFYHHYHSKRGMWS 1027
The following BLAST results are available for this feature:
BLAST of TCONS_00017941-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
B4GN46.028e-4234.72N-acetyl-beta-glucosaminyl-glycoprotein 4-beta-N-a... [more]
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