TCONS_00017920-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00017920-protein
Unique NameTCONS_00017920-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1363

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00017920-protein ID=TCONS_00017920-protein|Name=TCONS_00017920-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1363bp
MANKNLKRGDDPIGKAFKSDRNFQELLKCGIFDDYFNTFLSLPIFAKRFF
YRKDTGMFEIDPPVKRNAHYLIYDKIITWIRVNRGSIFLMTGICNEYRFV
EQLSKLDIPLEIDGYTKEELKKYQKQYTRKVLDIQRMKRFFEGSIGERLV
QLWMDAERYHRQVPDNCHRFVLKEISDKYLVEGAPQGLNHSLREKINXDK
YLVEGAPQGLNHSLREKINSYLHEAYISKQYSEVNYPTLLVPVQEMILKS
LQDYWLPKYFIHRLKRKRLAIMRWGSGKKACRSNLNSALEHKEQTKDKKP
AAMLDVVTQLREKQKNKIELMRQGLGEDGEKLPDSRSGSQEPHNEHGSPD
TEETEETKDDSSSSDDDGLIGNRRTRSEKIRAQATLEYVLNGLELEAEGT
KRLAKRIKKKKRIIPVKKNKSSFNRLRIDIHGIETDNKAVVTEIEHIMAS
EDQLENDREIFPALAQPMASCGHEKSNKNRKATLYEAMYAMKDDYEADTE
DDLAKTKVGRNSLNNDRMSPQSGQSDSSKKWRDVGRKAVSLAGRRRRSNV
SPNTGESPTGVKLPPLINTITQTSRSFVAPKIHVRDSYVQIQPPYTKKFL
NKNVLNIFPEKRQQILTAALTTDQIAGNPLLQYFKKNGLVEAANGLRFWS
ASTHMLTDTRFYEPLERKRQCQIIINLYLKPSAEYEVCLDAKMRQELTNA
LLDDHGITKLMEASVVITESLMPAWENFLRNDEEMFLKYTTKQRHPNRKY
DDQFFFDFTPENSEEEDDEAIEEYLKKLQEKEKEKVFVKKFHGSRMWRAM
ELAISIGLGHEDVLKDANESEQWSTDQDKGHSDNSSSDDEAGSLNLRNLH
LISLKAQRANQKKLQALFGHNPGNIALMHDYSGGHAAAFNSLYNESGNED
DGFDGNNKLINNERNLKNIQQPAKPRSFYDILSEPAQFDFFKRYLVKEKS
ETPLLFWSAVESMRTMSKSGKARQGRATGIVKRYFGASTDYGKGLQCEAD
IIRDICLMDKVSPAMLVSAQACVAKSLEENWFTKYLQTFQDDGGMIGVQI
LPVFGHKDLKTVKQKSRGLWRMFTRNVISFRRGIMNPDTLKMFRGFLILQ
HEINVEQFKASQNAEAAVVVGGGGPQGQNVAPQGVPNAGAGPPGGNTVQH
PPRIVINNKLIYTERLVADLQFWSEVERYKDFADAVVLCAKLGNYTKDDE
LIVVKKAQTIVECFIESQISPKVQINISNELGDNIINLVSNGIIERGLFH
EAALTTFSILINFWKKFCLFRFLPKEVALGKRSPVKNNRSVQIASKENAI
RLNRMKKISLPPDEEHPKIMFSLQLGIRLAAVKPGRRGRKGGASQQVDVF
MTPSEQNAVSMFY
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010048XLOC_010048Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00017920TCONS_00017920Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016137RGS
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 390..410
NoneNo IPR availableCOILSCoilCoilcoord: 764..784
NoneNo IPR availableGENE3D1.10.167.10coord: 147..253
e-value: 2.2E-4
score: 20.8
coord: 631..787
e-value: 8.2E-4
score: 19.0
NoneNo IPR availableGENE3D1.10.167.10coord: 1168..1262
e-value: 2.3E-7
score: 30.4
coord: 951..1029
e-value: 0.049
score: 13.3
IPR016137RGS domainPFAMPF00615RGScoord: 927..1038
e-value: 2.6E-9
score: 37.3
IPR016137RGS domainPROSITEPS50132RGScoord: 927..985
score: 11.802
IPR016137RGS domainPROSITEPS50132RGScoord: 1170..1260
score: 8.602
IPR016137RGS domainSUPERFAMILY48097Regulator of G-protein signaling, RGScoord: 239..260
coord: 137..208
IPR016137RGS domainSUPERFAMILY48097Regulator of G-protein signaling, RGScoord: 1164..1268
IPR016137RGS domainSUPERFAMILY48097Regulator of G-protein signaling, RGScoord: 925..1038
IPR016137RGS domainSUPERFAMILY48097Regulator of G-protein signaling, RGScoord: 642..732

Blast
[Close]
BLAST of TCONS_00017920-protein vs. Swiss-Prot (Human)
Match: RGSL (Regulator of G-protein signaling protein-like OS=Homo sapiens GN=RGSL1 PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 4.586e-36
Identity = 162/685 (23.65%), Postives = 284/685 (41.46%), Query Frame = 0 
Query:  619 ALTTDQIAGNPLLQYFKKNGLVEAANGLRFWSASTHMLT--------DTRFYEPLERKRQCQIIINLYLKPSAEYEVCLDAKMR--QELTNALLDDHGITKLMEASVVITESLMPAWENFLRNDEEMFLKYTTKQRHPNRKYDDQFFFDFTPENSEEEDDEAIEEYLKKLQEKEKEKVFVKKFHGSRMWRAMELAISIGLGHEDVLKDANESEQWSTDQDKGHSDNSSSDDEAGSLNLRNLHLISLKAQRANQKKLQALFGHNPGNIA--LMHDYSGGHAAAFNSLYNESGNEDDG-----------FDGNNKLINNERNLKNIQQPA-KPRSFYDILSEPAQFDFFKRYLVKEKSETPLLFWSAVESMRTMSKSGKARQGRATGIVKRYFGASTDYGKGLQCEADIIRDICLMDKVSPAMLVSAQACVAKSLEENWFTKYLQTF----QDDGGMIGVQILPVFGHKDLKTVKQKS--RGLWRM--FTRNVISFRRGIMNPDTLKMFRGFLILQHEINVEQFKASQNAEAAVVVGGGGPQGQNVAPQGVPNAGAGPPGGNTVQHPPRIVINNKLIYTERLVADLQFWSEVERYKDFADAVVLCAKLGNYTKDDELIVVKKAQTIVECFIESQISPKVQINISNELGDNIINLVSNGIIERGLFHEAALTTFSILINFWKKFCLFR 1271
            AL  D  AGNP   + KK  L      L  W    H L+            +  L   R C++ +N  + P      CL  K +  Q L   L     I  + +A   I + L P ++ FL  DEE                 D +F  FT +N      +   E++ K     +E + + K    R+ +++EL+          L D  E      D  +     +    + GSL +     + L      +   + L   NP      +  DY          +Y E   + D               N K+   +R L  +++P+ +PR+  ++L      +FF+ +L + K++ PL F +AV+ + ++  + K  +     ++K +F       + LQC+A II++I  M  V+ + L++ Q  V KS+EE WF  Y   F    Q+      VQI      K + T  Q+S  +G  RM  F R+   +RR ++NP   + F  +L  + + + E F  + N       G   P   NV      N          +    R +  +++I     + DL F+SE+E++ D   +  +      Y ++D +++  K   I + F+ S I PK+++N+     D I+  ++ G ++R +FH A ++ F +++ FWK+FC ++
Sbjct:  373 ALCADACAGNPFRDHLKKLNLKVEIQLLDLWQDLQHFLSVLLNNKKNGNAIFRHLLGDRICELYLNEQIGP------CLPLKSQTIQGLKELLPSGDVIPWIPKAQKEICKMLSPWYDEFL--DEE-----------------DYWFLLFTTQNRFISSRQHKREFIGK-----EENILLYK----RIQQSLELS--------QALADMKE-----MDYRQWRKIATEDLKQGGSLQVELTSPVFLTD--ITKMSFEELCYKNPKMAIQKISDDYK---------IYCEKAPKIDFKMEIIKETKTVSRSNRKMSLLKRTL--VRKPSMRPRNLTEVLLNTQHLEFFREFLKERKAKIPLQFLTAVQKI-SIETNEKICKSLIENVIKTFFQGQLSPEEMLQCDAPIIKEIASMRHVTTSTLLTLQGHVMKSIEEKWFKDYQDLFPPHHQEVEVQSEVQISSRKPSKIVSTYLQESQKKGWMRMISFIRSFCKYRRFMLNPSKRQEFEDYLHQEMQNSKENFTTAHNTS-----GRSAPPSTNVRSADQENG--------EITLVKRRIFGHRIITVNFAINDLYFFSEMEKFNDLVSSAHMLQVNRAYNENDVILMRSKMNIIQKLFLNSDIPPKLRVNVPEFQKDAILAAITEGYLDRSVFHGAIMSVFPVVMYFWKRFCFWK 983
The following BLAST results are available for this feature:
BLAST of TCONS_00017920-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RGSL4.586e-3623.65Regulator of G-protein signaling protein-like OS=H... [more]
back to top