TCONS_00017872-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00017872-protein
Unique NameTCONS_00017872-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length292

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00017872-protein ID=TCONS_00017872-protein|Name=TCONS_00017872-protein|organism=Clytia hemisphaerica|type=polypeptide|length=292bp
VFDEHLEQEELQNAQRICEELKVPHEILTAGEVNERYKPFHIQQHSKTLL
DTFGGTLIASKCLTVLQRLFMKAGGVLKDGEQVKNIRPGKICTVSTNKGE
YEAKAIVITPGSFASKILPKVGLNLPLQPIRTHLCFWKVLKEKEGTVESG
FPSFMMDKYHVYGTACLEYPGLLKIGLHGGKQVTCDYPDIENPDFENQKR
FIREQMKGVECKPSIVEPCLYTETPDQDFILDFHPKYSNIVIGAGFSGTG
FKMAPITGKILANMALDQNHGYDISEFRMTRFENIIQTSSHL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010014XLOC_010014Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00017872TCONS_00017872Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006076FAD-dep_OxRdtase
IPR023753FAD/NAD-binding_dom
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0016491 oxidoreductase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006076FAD dependent oxidoreductasePFAMPF01266DAOcoord: 7..264
e-value: 1.4E-23
score: 84.0
NoneNo IPR availableGENE3D3.30.9.10coord: 1..225
e-value: 8.6E-19
score: 67.7
NoneNo IPR availableSUPERFAMILY54373FAD-linked reductases, C-terminal domaincoord: 130..225
IPR023753FAD/NAD(P)-binding domainSUPERFAMILY51905FAD/NAD(P)-binding domaincoord: 225..283
coord: 8..127

Blast
[Close]
BLAST of TCONS_00017872-protein vs. Swiss-Prot (Human)
Match: SOX (Peroxisomal sarcosine oxidase OS=Homo sapiens GN=PIPOX PE=1 SV=2)

HSP 1 Score: 221.476 bits (563), Expect = 5.177e-70
Identity = 106/287 (36.93%), Postives = 170/287 (59.23%), Query Frame = 0 
Query:    7 EQEELQNAQRICEELKVPHEILTAGEVNERYKPFHIQQHSKTLLDTFGGTLIASKCLTVLQRLFMKAGGVLKDGEQVKNIRPGKICTVSTNKGEYEAKAIVITPGSFASKILPKVGLNLPLQPIRTHLCFWKVLKEKEGTVESGFPSFM---MDKYHVYGTACLEYPGLLKIGLHGGKQV-----TCDYPDIENPDFENQKRFIREQMKGVECKPSIVEPCLYTETPDQDFILDFHPKYSNIVIGAGFSGTGFKMAPITGKILANMALDQNHGYDISEFRMTRFENI 285
            E +EL+  Q      +V H+ L++ E+ +R+    + +    LLD  GG + A K L  LQ    + GG+++DGE+V  I PG + TV T    Y+AK++VIT G + +++L  +G+ +PLQ +R ++C+W+ +      V   FP F+   +  +H+YG    EYPGL+K+  H G         C     +  D +    F+R+ +  ++ +P+++E C+YT TPD+ FILD HPKY NIVIGAGFSG GFK+AP+ GKIL  +++     YD++ FR++RF ++
Sbjct:   99 ENQELKTIQANLSRQRVEHQCLSSEELKQRFPNIRLPRGEVGLLDNSGGVIYAYKALRALQDAIRQLGGIVRDGEKVVEINPGLLVTVKTTSRSYQAKSLVITAGPWTNQLLRPLGIEMPLQTLRINVCYWREMVPGSYGVSQAFPCFLWLGLCPHHIYGLPTGEYPGLMKVSYHHGNHADPEERDCPTARTDIGDVQILSSFVRDHLPDLKPEPAVIESCMYTNTPDEQFILDRHPKYDNIVIGAGFSGHGFKLAPVVGKILYELSMKLTPSYDLAPFRISRFPSL 385
The following BLAST results are available for this feature:
BLAST of TCONS_00017872-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SOX5.177e-7036.93Peroxisomal sarcosine oxidase OS=Homo sapiens GN=P... [more]
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