TCONS_00017868-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00017868-protein
Unique NameTCONS_00017868-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1563

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00017868-protein ID=TCONS_00017868-protein|Name=TCONS_00017868-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1563bp
MDIKSELKSARDCIKKKEYKEAVKHCKNVLKHDKENYNAFVFIGKCATEL
EQYQQAKEAYTRAIEQNKEQPLAWQGLCSLLEKAKNHAWKSDMISAYTSL
LENESFSQDTEKWLDLAQKNLKLLKNENKNIDVLTLLEKILGRCPNEEKF
TFYQEKINILERLLIKDPDNIEFKLKLKETFTNLIHLDTVDGEILITFKA
KQVEFICKNAIVLDEKLDSFFNLCEKYHKVSPHNKSIADCFAVAIFNKAV
CQPESLKELLEPMTSILPHVQENDKNLLNGLLNIANGKVYLEELLKIQAK
HQKCVVAFFHAREHHRCHKFQSAKEFIALSKENIQSLPFKESKDALAKHT
CLMEIEILLEKNINSETEENEFYALFQQFTGPGVKKLILEIKFLIKTGNR
DKAISSLENLGKLQLNEEEKSIMLQLQAEISFLEEKFYDAEIRLQEALAL
KDNYLDRFLLAKVYWKLGEEKQEYLPKAYTEFLKAAKLDAYYAPTFFYLG
KYQKELIKDFVKAAKCLEKSFSLNDKDEDAANMLADLYLQQDNEDKAIEI
YVKITSEAKVGQAIWAWICLGLIYLKRKLGDEAIVCFQNGLRGDTTISHH
WECLGDAYFEKGSFVSALKAFTKAVELDTDSAYCKFKMAKIKQMLKMDVE
AIEDYKQLLQHHHDYVPALLGLSETYLHLEKEKLKIVFDGKAVECAQQVV
DYVTRAVEKQPNFSILWKTIADALVLLHVVCDDKCHLSIPVSLQKIVSYT
VKSNVAHKCDIMEIACRCYMVAIKIKENISSYWHDLAVCTYFQAMVLKGQ
EGQSKIIQSIQIIKKALALNSTNHQYWNTLGVVAGSSGPSEKICGHSIDD
AHNPSLSQHAFIKSLELNAQDAHVWANLGILYLKHDKIEAAHEAFKKAQA
CDPALPQAWIGQAMIAECVMQTEDEKYEAMDLFRHATELQFHGEGSLAYA
QWVCRLLSQIKNKSVLISTSPKADMSHLPHDVRRIVTKASGSLHKSTERY
TDNAYAFNTLGVLLEQEGLFKQAEQAFACARKLLSTQQTDNEHNEKLRKV
LLNQARSLCYLKQYSKAIEIYKVCDLQTPSEVCWLAFAYYHSGMLDLSIK
EYEKALKLSTTDSHRSEILAALGMVYYADQKNDLAKSSLFESTQQADSSE
HGIMALAALGLLHGDGTLATAALSELSRHRHKNMKQFEQKKIKLNASCYQ
MQGQSILAKRELLKGIHRYPQDSYFWSELAKYILYHDTSNYKLSLHCTAV
ATSQMSTKIASLCDAMTTFAFPITGTEKLLKSVQRLLHNNPEDARSWVLL
AAALNADTALHSKESMREKTVQVTNLALKKVDETLSSLKSAPSTLVVLDS
MALNQYNNLYSWMMQLYVISNVYFGDVNFAQMFADKVLPSLKGDENAFED
FVFLKGLATIQENLSKGDQVSIENVRVMATLATKTAENWKWTILHKIYCT
MAMPSAAEFCLRQLVLLGIQNKECYENVLLQTTLLGIKTFDVAGDRKWLD
ENKAILSQIFESIAEPDEVMILLRAIVFYQDGNKKAAMKYLQKLVFADRT
VGQLAESLTRKWS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010012XLOC_010012Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00017868TCONS_00017868Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom
IPR013026TPR-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 416..436
NoneNo IPR availableCOILSCoilCoilcoord: 50..70
NoneNo IPR availableCOILSCoilCoilcoord: 114..134
NoneNo IPR availableGENE3D1.10.150.200coord: 983..1056
e-value: 9.0E-8
score: 31.4
NoneNo IPR availableGENE3D1.25.40.120coord: 9..252
e-value: 7.6E-19
score: 67.4
NoneNo IPR availableGENE3D1.25.40.120coord: 753..969
e-value: 1.6E-18
score: 66.4
NoneNo IPR availableGENE3D1.25.40.120coord: 544..729
e-value: 2.5E-27
score: 95.3
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 528..561
e-value: 310.0
score: 1.9
coord: 1079..1112
e-value: 32.0
score: 10.5
coord: 37..70
e-value: 0.01
score: 25.1
coord: 1004..1037
e-value: 6.5
score: 15.7
coord: 872..905
e-value: 0.039
score: 23.1
coord: 493..527
e-value: 230.0
score: 3.0
coord: 1116..1149
e-value: 160.0
score: 4.5
coord: 632..665
e-value: 29.0
score: 10.9
coord: 421..454
e-value: 52.0
score: 8.7
coord: 564..597
e-value: 4.9
score: 16.1
coord: 598..631
e-value: 0.24
score: 20.4
coord: 1518..1551
e-value: 110.0
score: 5.8
coord: 3..36
e-value: 22.0
score: 12.0
IPR019734Tetratricopeptide repeatPFAMPF13181TPR_8coord: 39..68
e-value: 0.056
score: 13.6
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 528..561
score: 5.517
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 1079..1112
score: 6.815
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 564..597
score: 6.107
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 1004..1037
score: 6.225
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 37..70
score: 8.998
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 872..905
score: 10.65
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 598..631
score: 10.62
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 1057..1253
e-value: 4.0E-11
score: 42.3
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 516..543
e-value: 3.5E-5
score: 23.2
coord: 466..515
e-value: 4.9E-4
score: 19.5
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 385..465
e-value: 0.01
score: 15.3
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 1275..1560
e-value: 7.1E-4
score: 18.6
IPR011990Tetratricopeptide-like helical domainSUPERFAMILY48452TPR-likecoord: 995..1136
IPR011990Tetratricopeptide-like helical domainSUPERFAMILY48452TPR-likecoord: 1085..1235
IPR011990Tetratricopeptide-like helical domainSUPERFAMILY48452TPR-likecoord: 423..603
IPR011990Tetratricopeptide-like helical domainSUPERFAMILY48452TPR-likecoord: 748..909
coord: 987..1033
IPR011990Tetratricopeptide-like helical domainSUPERFAMILY48452TPR-likecoord: 13..87
IPR011990Tetratricopeptide-like helical domainSUPERFAMILY48452TPR-likecoord: 564..726
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 1079..1149
score: 7.374
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 1004..1037
score: 6.633
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 872..905
score: 10.002
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 493..665
score: 19.332
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 3..70
score: 11.989

Blast
BLAST of TCONS_00017868-protein vs. Swiss-Prot (Human)
Match: TTC37 (Tetratricopeptide repeat protein 37 OS=Homo sapiens GN=TTC37 PE=1 SV=1)

HSP 1 Score: 497.278 bits (1279), Expect = 1.997e-149
Identity = 349/1061 (32.89%), Postives = 533/1061 (50.24%), Query Frame = 0
Query:  426 LQAEISFLEEKFYDAEIRLQEALALKDNYLDRF--LLAKVYWKLGEEKQEYLPKAYTEFLKAAKLDAYYAPTFFYLGKYQKELIKDFVKAAKCLEKSFSLNDKDEDAANMLADLYLQQDNEDKAIEIYVKITSEAKVGQAIWAWICLGLIYLKRKLGDEAIVCFQNGLRGDTTISHHWECLGDAYFEKGSFVSALKAFTKAVELDTDSAYCKFKMAKIKQMLKMDVEAIEDYKQLLQHHHDYVPALLGLSETYLHLEKEKLKIVFDGKAVECAQQVVDYVTRAVEKQPNFSILWKTIADALVLLHVVCDDKCHLSIPVSLQKIVSYTVKSNVAHKCDIMEIACRCYMVAIKIKENISSYWHDLAVCTYFQAMVLKGQEGQSK------IIQSIQIIKKALALNSTNHQYWNTLGVVAGSSGPSEKICGHSIDDAHNPSLSQHAFIKSLELNAQDAHVWANLGILYLKHDKIEAAHEAFKKAQACDPALPQAWIGQAMIAECVMQTEDEKYEAMDLFRHATELQFHGEGSLAYAQWVCRLLSQIKNKSVLISTSPKADMSHLPHDVRRIVTKASGSLHKSTERYTDNAYAFNTLGVLLEQEGLFKQAEQAFACARKLLSTQQTDNEHNEKLRKVLLNQARSLCYLKQYSKAIEIYKVCDLQTPSEVCWLAFAYYHSGMLDLSIKEYEKALKLSTTDSHRSEILAALGMVYYADQKNDLAKSSLFESTQQADSSEHGIMALAALGLLHGDGTLATAALSELSRH-RHKNMKQFEQKKIKLNASCYQMQGQSILAKRELLKGIHRYPQDSYFWSELAKYILYHDTSNYKLSLHCTAVA--TSQMSTKIASLCDAMTTFAFPITGTE----KLLKSVQRLLHNNPEDARSWVLLAAALNADTALHSKESMREKTVQVTNLALKKVDETLSSLKSAPSTLVVLDSMALNQYN-NLYSWMMQLYVISNVYFGDVNFAQMFADKVLPSLKGDENAFEDFVFLKGLATIQENLSKGDQVSIENVRVMATLATKTAENWKWTILHKIYCTMAMPSAAEFCLRQLVLLGIQ 1470
            L+A I F ++ +  AE   Q AL  KD  +  +   L   YW +GEE ++   KA T FLKAA+LD Y    F YLG Y ++++ D  +A  C  K+F L+D D ++     DL ++ ++ + A+ I   +T +A  G A WAW+  GL YLK     +A+   Q  LR D    + WE LG+AY  +G + +ALK+FTKA EL+ +S Y  FK+A I+Q+L    EA+  Y+ +++   DYVPAL GL E +L + K  L    DGKAV+  ++ ++Y T A++ + + S LWK   DA   L+ V   K ++ +   L  ++       V  K +++ +  RCY  A+K+  + S+ W DL +  Y QA  L  + G +       + +S+  +KKA+ L+S NH YWN LGVVA  SG              N +L+QH FIKS++    +A  W NLG+LYL ++ IE AHEAFK AQ+ DP+    WIGQA+IAE V       Y+ MDLFRH TEL  H EG+L YA WVC  L    N+   +       M+ +P         A   L+K  ER  + A AF  LG L E   L K+A  A+  A  LL T +  + +N  +R    N  R LC   +Y KAI+ +K   L+   ++   A A +  G+   S K YE+AL +  ++  ++ IL AL +  Y   K D+AK+ LF+ +   + +   + AL ALGL   D TL+ AAL+EL +H +HK+      ++  L ++ Y +QG+S+  ++++ K +H  P D   WS L++ +  +   N K  +    VA        K A L  A+   A   +  E      LK++Q+    +P D   W  L AA +AD          +K   V N   K++D  L+ L +  ++  + D      YN +L  W +   V   +  G ++ A+    K L S   D+ A    +       + E+        +E ++      + +   W+W  L  +Y +  M  AAE C R+ + L  Q
Sbjct:  425 LEALIHFTKKDYLQAEKCFQRALE-KDTEVAEYHYQLGLTYWFMGEETRKDKTKALTHFLKAARLDTYMGKVFCYLGHYYRDVVGDKNRARGCYRKAFELDDTDAESGAAAVDLSVELEDMEMALAILTTVTQKASAGTAKWAWLRRGLYYLKAGQHSQAVADLQAALRADPKDFNCWESLGEAYLSRGGYTTALKSFTKASELNPESIYSVFKVAAIQQILGKYKEAVAQYQMIIKKKEDYVPALKGLGECHLMMAKAALVDYLDGKAVDYIEKALEYFTCALQHRADVSCLWKLAGDACTCLYAVAPSKVNVHV---LGVLLGQKEGKQVLKKNELLHLGGRCYGRALKLM-STSNTWCDLGINYYRQAQHL-AETGSNMNDLKELLEKSLHCLKKAVRLDSNNHLYWNALGVVACYSGIG------------NYALAQHCFIKSIQSEQINAVAWTNLGVLYLTNENIEQAHEAFKMAQSLDPSYLMCWIGQALIAEAV-----GSYDTMDLFRHTTELNMHTEGALGYAYWVCTTLQDKSNRETELYQYNILQMNAIP--------AAQVILNKYVERIQNYAPAFTMLGYLNEHLQLKKEAANAYQRAILLLQTAEDQDTYNVAIR----NYGRLLCSTGEYDKAIQAFKSTPLEVLEDIIGFALALFMKGLYKESSKAYERALSIVESEQDKAHILTALAITEYKQGKTDVAKTLLFKCSILKEPTTESLQALCALGLAMQDATLSKAALNELLKHIKHKDSN---YQRCLLTSAIYALQGRSVAVQKQISKAVHSNPGDPALWSLLSRVVAQYAQRNAKGGVVAGNVAHILDSNHGKKALLYTAVNQLAMGSSSAEDEKNTALKTIQKAALLSPGDPAIWAGLMAACHAD----------DKLALVNNTQPKRIDLYLALLSAVSAS--IKDEKFFENYNQSLEKWSLSQAVTGLIDTGRISEAETLCTKNLKS-NPDQPAVILLLRQVQCKPLLESQKPLPDAVLEELQKTVMSNSTSVPAWQW--LAHVYQSQGMMRAAEMCYRKSLQLASQ 1432          

HSP 2 Score: 120.939 bits (302), Expect = 3.102e-27
Identity = 67/140 (47.86%), Postives = 90/140 (64.29%), Query Frame = 0
Query:    2 DIKSELKSARDCIKKKEYKEAVKHCKNVLKHDKENYNAFVFIGKCATELEQYQQAKEAYTRAIEQNKEQPLAWQGLCSLLEKAKNHAWKSDMISAYTSLLENESFSQDTEKWLDLAQKNLKLLKNENKNIDVLTLLEKIL 141
            ++K+ LKSARD I+ KEYKEA+KHCK VLK +K NYNA+VFIG  A ELEQ  QA+ AY +A E   +Q LAWQGL +L EK  +   K D+   Y  LL+    S D +KW D+ +K + L   E K+++V     K++
Sbjct:    5 EVKTALKSARDAIRNKEYKEALKHCKTVLKQEKNNYNAWVFIGVAAAELEQPDQAQSAYKKAAELEPDQLLAWQGLANLYEKYNHINAKDDLPGVYQKLLDLYE-SVDKQKWCDVCKKLVDLYYQEKKHLEVARTWHKLI 143          
The following BLAST results are available for this feature:
BLAST of TCONS_00017868-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TTC371.997e-14932.89Tetratricopeptide repeat protein 37 OS=Homo sapien... [more]
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