TCONS_00017835-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00017835-protein
Unique NameTCONS_00017835-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length885

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00017835-protein ID=TCONS_00017835-protein|Name=TCONS_00017835-protein|organism=Clytia hemisphaerica|type=polypeptide|length=885bp
MSARKETDKMESLVEMFRCFICMERVKDARLCPHCSKLCCYSCMQKWLTE
QRAQCPHCRACLHLKDLIHCRWVEEVTEQIDHLKSKKSASNFEDSNDGKC
EKHNEKMSVYCETCQVCICHNCALWGGLHAQHQFQPLEKVYEDHVNKIME
RKSQLKGRLVELISLVQDVEKNVESVRNAKEERVREIRNAVELMIARLDT
HLKNKLLTLMGQKNALTQETELLESILQEVEHQVKVCTKDQLLVKSAELL
HMFEQVQRKPMASFVTASIPADFTSEIVPAFDSSVFQIERFSQLRHKGDP
VYSRPLNVNGLSWRLKVYPDGNGVVRGNYLSVFLELTSGLPETSKYEYRV
EMIHQQGSDCTKNIVREFASDFEVGECWGYNRFFRLDLLASEGYLNQKED
SVILRFQVRPPTFYQKCRDQQWHIQQLESQSVNQATQITSLKERLSIELT
RHRQNNALPGTDVSFLSLSLLEQSLTESDASFNSRKDKRKGTALQNRIKQ
FRTTTSTATTTTADYRQPVHPTSFQPSALLFGEEEDTSIEGADEGEDLHE
NETTQQYGDENEATQQFIDVEDDEEIESKEKIEDLEEQGTDAFYSSEQQQ
RFLDDDESDEKDKDDDVMASIAMSSSTQRSLLTADERESRHQQLIPLFND
CQDEESRLMKDVEECNPSKPSSTTTTTMERFFTQPQSVSPSSVHSQSSLE
TTLLSHDLRYDDPEEKALLDLFDLTDVHLSTNLSSSNEERASDLNLLSAD
DTSTTANSTMTSDDHFSRMIRSLQVSRENATNSCRPMSDLATPTTDHALR
ETSLGGARKRANDARLNVDMVEDGLSEAKSTASHLEKDFQGLEKWTCSLL
SNLQSKPNSSSQEQKDSQSVEHDDDESNSSQPENE
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010006XLOC_010006Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00017835TCONS_00017835Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003649Bbox_C
IPR000315Znf_B-box
IPR002083MATH/TRAF_dom
IPR008974TRAF-like
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005622 intracellular
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 568..588
NoneNo IPR availableCOILSCoilCoilcoord: 424..444
NoneNo IPR availableCOILSCoilCoilcoord: 152..186
NoneNo IPR availableCOILSCoilCoilcoord: 213..233
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 479..530
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 542..562
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 734..763
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 853..885
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 585..614
NoneNo IPR availableCDDcd03773MATH_TRIM37coord: 278..411
e-value: 4.70677E-75
score: 241.55
NoneNo IPR availableCDDcd00021BBOXcoord: 99..137
e-value: 1.54135E-7
score: 48.0523
NoneNo IPR availableSUPERFAMILY57845B-box zinc-binding domaincoord: 94..155
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 11..79
IPR003649B-box, C-terminalSMARTSM00502RAD_5coord: 137..259
e-value: 2.3E-17
score: 73.7
IPR000315B-box-type zinc fingerSMARTSM00336bboxneu5coord: 95..137
e-value: 3.5E-8
score: 43.2
IPR000315B-box-type zinc fingerPFAMPF00643zf-B_boxcoord: 96..137
e-value: 1.4E-8
score: 34.6
IPR000315B-box-type zinc fingerPROSITEPS50119ZF_BBOXcoord: 95..137
score: 10.48
IPR002083MATH/TRAF domainSMARTSM00061math_3coord: 286..389
e-value: 9.5E-9
score: 45.1
IPR002083MATH/TRAF domainPFAMPF00917MATHcoord: 288..404
e-value: 6.1E-8
score: 32.7
IPR002083MATH/TRAF domainPROSITEPS50144MATHcoord: 281..408
score: 18.908
IPR008974TRAF-likeGENE3D2.60.210.10coord: 255..412
e-value: 1.3E-28
score: 99.5
IPR008974TRAF-likeSUPERFAMILY49599TRAF domain-likecoord: 285..410
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 1..146
e-value: 7.7E-17
score: 61.0
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 19..59
score: 10.512
IPR001841Zinc finger, RING-typeCDDcd00162RINGcoord: 19..62
e-value: 3.67673E-8
score: 50.1368

Blast
[Close]
BLAST of TCONS_00017835-protein vs. Swiss-Prot (Human)
Match: TRI37 (E3 ubiquitin-protein ligase TRIM37 OS=Homo sapiens GN=TRIM37 PE=1 SV=2)

HSP 1 Score: 688.723 bits (1776), Expect = 0.000e+0
Identity = 308/453 (67.99%), Postives = 383/453 (84.55%), Query Frame = 0 
Query:   10 MESLVEMFRCFICMERVKDARLCPHCSKLCCYSCMQKWLTEQRAQCPHCRACLHLKDLIHCRWVEEVTEQIDHLKSKKSASNFEDSNDGKCEKHNEKMSVYCETCQVCICHNCALWGGLHAQHQFQPLEKVYEDHVNKIMERKSQLKGRLVELISLVQDVEKNVESVRNAKEERVREIRNAVELMIARLDTHLKNKLLTLMGQKNALTQETELLESILQEVEHQVKVCTKDQLLVKSAELLHMFEQVQRKPMASFVTASIPADFTSEIVPAFDSSVFQIERFSQLRHKGDPVYSRPLNVNGLSWRLKVYPDGNGVVRGNYLSVFLELTSGLPETSKYEYRVEMIHQQGSDCTKNIVREFASDFEVGECWGYNRFFRLDLLASEGYLNQKEDSVILRFQVRPPTFYQKCRDQQWHIQQLESQSVNQATQITSLKERLSIELTRHRQNNALPGTD 462
            +ES+ E+FRCFICME+++DARLCPHCSKLCC+SC+++WLTEQRAQCPHCRA L L++L++CRW EEVT+Q+D L+   S +  E++   KCE H+EK+SV+C TC+ CICH CALWGG+H  H F+PL ++YE HV K+ E  ++L+ RL+ELISLVQ+VE+NVE+VRNAK+ERVREIRNAVE+MIARLDT LKNKL+TLMGQK +LTQETELLES+LQEVEHQ++ C+K +L+ KS+E+L MF+QV RKPMASFVT  +P DFTSE+VP++DS+ F +E FS LR + DPVYS PL V+GL WRLKVYPDGNGVVRG YLSVFLEL++GLPETSKYEYRVEM+HQ  +D TKNI+REFASDFEVGECWGYNRFFRLDLLA+EGYLN + D+VILRFQVR PTF+QK RDQ W+I QLE+   +   QI +LKERL+IEL+R +++  L   D
Sbjct:    6 VESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQLRELVNCRWAEEVTQQLDTLQ-LCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALWGGMHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRNAKDERVREIRNAVEMMIARLDTQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRSCSKSELISKSSEILMMFQQVHRKPMASFVTTPVPPDFTSELVPSYDSATFVLENFSTLRQRADPVYSPPLQVSGLCWRLKVYPDGNGVVRGYYLSVFLELSAGLPETSKYEYRVEMVHQSCNDPTKNIIREFASDFEVGECWGYNRFFRLDLLANEGYLNPQNDTVILRFQVRSPTFFQKSRDQHWYITQLEAAQTSYIQQINNLKERLTIELSRTQKSRDLSPPD 457
The following BLAST results are available for this feature:
BLAST of TCONS_00017835-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TRI370.000e+067.99E3 ubiquitin-protein ligase TRIM37 OS=Homo sapiens... [more]
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