TCONS_00017832-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00017832-protein
Unique NameTCONS_00017832-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1319

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00017832-protein ID=TCONS_00017832-protein|Name=TCONS_00017832-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1319bp
MPGIVQDSVVSSEQNSPDPVGKKKLEVDSSLLKDDQETSSNGAEKAEENI
DTSETKKEAEKPTAESTDKPTTESTDKPEVPMKLLDLKVSINGLSETLPV
QLSNHDTVQDIRQIILEKPECCYRTCFSLYLEGTRLDDFMELHDIPGLSD
NSVIKVVDEPYSIREARIHIRRLRDLLVTMLEPNAFTATDNLSLSYCSAI
TEVDVEEEAWKAMKDKNNYQKGNVTLPPNFAGLKSKPSVEQIIIPDYDVQ
LPTCLKDLRFSSWNPPPGYRKLAGDLLYLEVVTLDHPEHVYHITSSSNGF
FVNRITNHLFDPRPANDSQRSQTLAGLLNMISPLFKKNFCSIQRTTIKKH
PLELVSSPQQVFPWVSPQFEHTRDPFRAEDAVTNRIGYEEQIPGQLRDWN
EELQSAKELPKKTRHQRTLRDRALYKITCDFIAAATRGAVAVVDGNVMAI
NPGEEEKMRMYIWNNIFFSFACDSRDHYQKYGGDEAAYTAASLDLKGVEL
YNKLDVEGLYTLGTVVVDYRGYRIIAQSIIPGILQREQENSVVYGSVDGG
KTIATHEQFLEKLKTAGLSLKIRPHKVINEKDEDVELCSSIECKGIIGAD
GRHYILDLFRSFPPDVNFLDVEKVERTLINGEAIPETKKAKKDEFEFPVP
HSQHLVSLRQAALEAFIGYKYVSFVKVIALNKLQDENKKDQNKTAAAEAK
KEAEKQEKSENEAMAAGCDKSTENDENSAEEIKTEGTVEAESDTKKEKEM
TEEEKEEEKQSDIRAVEAAATAIGSLSPQEFDIRFNPDAYVKEVIPSNSE
DEVAKKERLIMEDMSSFVCTTIIPKFIEDLANLSTTPIDGIALTDIMHTR
GINMRYLGKIAHTCSKKRNLSYVYGIAVKEMVLRAAKKQFKGCMQSANQR
CLSAAVSHFLNCFLSSFPSPQPHLPSEESNKKKKNKKRTQKLPHLPSNNN
VAWMSLSPSFLWMAITKHVQQHFGFKIESSNIESFTQEYKVQKVSMLREI
CKKTGIQMLLKEYDFENRKHTTFSHEDILSIFPIVKSVTPRATDATTIFE
LAQTRLQSGFFGEAHELMIEALNMFNQVYGPLHPDIVVCYRAIARIHYLA
DDGAQAVAFQKKAVIVAERIYGVDHPETLVAYVHLALYCYHAGLVSASLK
LMYRSRYLAILAYGEEHPDIATFDTNIGLMLHNQREFTTACQYLEHSCNL
QMKFHGAESLHTATGHHLVARALSALGDYKKALNNEKSTHSIYQKHFGTE
DARTKESGEALKTILNQAVMLQKTLKDIAEKGKVNPTKVPKLEDKTFDKK
ILTMVNKIEEIDIKTEERK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010005XLOC_010005Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00017832TCONS_00017832Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023231GSKIP_dom
IPR025697CLU_dom
IPR033646CLU-central
IPR028275CLU_N
IPR011991WHTH_DNA-bd_dom
IPR011990TPR-like_helical_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 738..761
NoneNo IPR availableCOILSCoilCoilcoord: 680..716
NoneNo IPR availableCOILSCoilCoilcoord: 1318..1319
NoneNo IPR availablePFAMPF13424TPR_12coord: 1170..1245
e-value: 1.1E-7
score: 31.9
coord: 1046..1114
e-value: 1.2E-8
score: 35.0
NoneNo IPR availableGENE3D3.40.50.300coord: 430..773
e-value: 9.0E-4
score: 17.7
NoneNo IPR availableGENE3D3.10.20.90coord: 80..163
e-value: 8.3E-4
score: 18.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..81
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 687..763
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 920..944
IPR023231GSKIP domainGENE3D3.30.2280.10coord: 249..351
e-value: 4.8E-17
score: 61.2
IPR023231GSKIP domainSUPERFAMILY103107Hypothetical protein c14orf129, hspc210coord: 252..353
IPR025697CLU domainPFAMPF13236CLUcoord: 398..618
e-value: 6.4E-90
score: 300.7
IPR033646CLU central domainPFAMPF12807eIF3_p135coord: 835..1015
e-value: 1.0E-53
score: 181.9
IPR033646CLU central domainCDDcd15466CLU-centralcoord: 837..1015
e-value: 5.75778E-59
score: 200.273
IPR028275Clustered mitochondria protein, N-terminalPFAMPF15044CLU_Ncoord: 105..177
e-value: 2.1E-17
score: 63.2
IPR011991Winged helix-turn-helix DNA-binding domainGENE3D1.10.10.10coord: 1061..1149
e-value: 9.6E-13
score: 47.7
coord: 1150..1199
e-value: 1.4E-4
score: 21.6
coord: 1200..1279
e-value: 4.6E-7
score: 29.5
IPR011990Tetratricopeptide-like helical domainSUPERFAMILY48452TPR-likecoord: 1159..1242
IPR011990Tetratricopeptide-like helical domainSUPERFAMILY48452TPR-likecoord: 1043..1152

Blast
BLAST of TCONS_00017832-protein vs. Swiss-Prot (Human)
Match: CLU (Clustered mitochondria protein homolog OS=Homo sapiens GN=CLUH PE=1 SV=2)

HSP 1 Score: 1063.52 bits (2749), Expect = 0.000e+0
Identity = 552/1255 (43.98%), Postives = 804/1255 (64.06%), Query Frame = 0
Query:   49 NIDTSET-KKEA---EKPTAESTDK--PTTESTDKPEVPMKLLDLKVSINGLS---ETLPVQLSNHDTVQDIRQIILEKPECCYRTCFSLYLEGTRLDDFMELHDIPGLSDNSVIKVVDEPYSIREARIHIRRLRDLLVTMLEPNAFTATDNLSLSYCSAITEVDVEEEAWKAMKDKNNYQKGNV-TLPPNFAGLKSKPSVEQIIIP----DYDVQLPTCLKDLRFSSWNPPPGYRKLAGDLLYLEVVTLDHPEHVYHITSSSNGFFVNRITNHLFDPRPANDSQRSQTLAGLLNMISPLFKKNFCSIQRTTIKKHPLELVSSPQQVFPWVSPQFEHTRDPFRAEDAVTNRIGYEEQIPGQLRDWNEELQSAKELPKKTRHQRTLRDRALYKITCDFIAAATRGAVAVVDGNVMAINPGEEEKMRMYIWNNIFFSFACDSRDHYQKYGGDEAAYTAASLDLKGVELYNKLDVEGLYTLGTVVVDYRGYRIIAQSIIPGILQREQENSVVYGSVDGGKTIATHEQFLEKLKTAGLSLKIRPHKVINEKDEDVELCSSIECKGIIGADGRHYILDLFRSFPPDVNFLDVEKVERTLINGEAIPETKKAKKDEFEFPVPHSQHLVSLRQAALEAFIGYKYVSFVKVIALNKLQDENKKDQNKTAAAEAKKEAEKQEKSENEAMAAGCDKSTENDENSAEEIKTEGTVEAESDTKKEKEMTEEEKEEEKQSDIRAVEA---AATAIGSLSPQEFDIRFNPDAYVKEV-IPSNSEDEVAKKERLIMEDMSSFVCTTIIPKFIEDLANLSTTPIDGIALTDIMHTRGINMRYLGKIAHTCSK---KRNLSYVYGIAVKEMVLRAAKKQFKGCMQSANQRCLSAAVSHFLNCFLSSFPSPQPHLPSEESNKKKKNKKRTQKLPHLPSNNNVAWMSLSPSFLWMAITKHVQQHFGFKIESSNIESFTQEYKVQKVSMLREICKKTGIQMLLKEYDFENRKHTTFSHEDILSIFPIVKSVTPRATDATTIFELAQTRLQSGFFGEAHELMIEALNMFNQVYGPLHPDIVVCYRAIARIHYLADDGAQAVAFQKKAVIVAERIYGVDHPETLVAYVHLALYCYHAGLVSASLKLMYRSRYLAILAYGEEHPDIATFDTNIGLMLHNQREFTTACQYLEHSCNLQMKFHGAESLHTATGHHLVARALSALGDYKKALNNEKSTHSIYQKHFGTEDARTKESGEALKTILNQAVMLQKTLKDIAEKG 1282
            N D  E+ KKEA   E P     D+  P  E+T +  + ++  D   S+  L+   E   +Q+S  + VQ+I Q+++++ + C+RTCFSL+L+G  LD F EL  + GL + SV++VV+EPY++REARIH+R +RDLL ++   +AF   D  SLS+ S  T+ D+ +      K K   +   +   PP +    S+   E+ + P    + D +   CLK L  S WNPPPG RK+ GDL+YL V+T +  +    IT+S+ GF++N+ T + F+P+PA+    S +L  LLN ISP FKKNF  +Q+  +++HP E +++P QV+ W +PQ EH  D  RAEDA T+R+GYEE IPGQ RDWNEELQ+ +ELP+K   +R LR+RA++K+  DF AAATRGA+AV+DGNVMAINP EE KM+M+IWNNIFFS   D RDHY+ +GGD AAY A + DL GV  YN +DVEGLYTLGTVVVDYRGYR+ AQSIIPGIL+R+QE SV+YGS+D GKT+ +H ++LE L+     LKI  H+V+N++DE+VELCSS+ECKGIIG DGRHYILDL R+FPPD+NFL V         GE +PE          FP  H   L  LRQ  ++AF+ ++Y+ F+K+ AL  +Q +N       ++ E    +  + KSE+     G +  +E + +SA            S   K KE+ E    ++  +D R+ E    A  A+GS+S   FDIRFNPD +   V  P + +DEV + ++ +++D ++F+ +  IP  ++D    +  P+DG  L ++M  RGINMRYLGK+     +   +  L +V+ I + E++ R+AK  FK  +Q      LSAA+SHFLNCFLSS+P+P  HLP++E   KK+NK+R  + P   + +N AW  ++P  LW  I +  + +F F +E   ++   + Y +QK+++LREI  KTGIQ+LLKEY F++R    F+ ED+L+IFP+VK V P+A+DA   F+  Q ++Q GF  E  EL+ EALN+FN VYG +H +   C R +AR+HY+  D A+A++ Q+KAV+++ER+ G +HP T+  Y+HLALYC+ +  +S +L L+YR+RYL +L +GE+HP++A  D NIGL+LH   E+  + ++LE++  +  K+HG ++L  A  HHLVAR   +  +++ AL +EK  ++IY+   G +  +TKES E LK +  QAV LQ+T+ +I   G
Sbjct:    4 NGDCPESLKKEAAAAEPPRENGLDEAGPGDETTGQEVIVIQ--DTGFSVKILAPGIEPFSLQVSPQEMVQEIHQVLMDREDTCHRTCFSLHLDGNVLDHFSELRSVEGLQEGSVLRVVEEPYTVREARIHVRHVRDLLKSLDPSDAFNGVDCNSLSFLSVFTDGDLGDSG----KRKKGLEMDPIDCTPPEYILPGSR---ERPLCPLQPQNRDWKPLQCLKVLTMSGWNPPPGNRKMHGDLMYLFVITAE--DRQVSITASTRGFYLNQSTAYHFNPKPASPRFLSHSLVELLNQISPTFKKNFAVLQKKRVQRHPFERIATPFQVYSWTAPQAEHAMDCVRAEDAYTSRLGYEEHIPGQTRDWNEELQTTRELPRKNLPERLLRERAIFKVHSDFTAAATRGAMAVIDGNVMAINPSEETKMQMFIWNNIFFSLGFDVRDHYKDFGGDVAAYVAPTNDLNGVRTYNAVDVEGLYTLGTVVVDYRGYRVTAQSIIPGILERDQEQSVIYGSIDFGKTVVSHPRYLELLERTSRPLKILRHQVLNDRDEEVELCSSVECKGIIGNDGRHYILDLLRTFPPDLNFLPVP--------GEELPEECARAG----FPRAHRHKLCCLRQELVDAFVEHRYLLFMKLAALQLMQ-QNASQLETPSSLENGGPSSLESKSED---PPGQEAGSEEEGSSA------------SGLAKVKELAETIAADDG-TDPRSREVIRNACKAVGSISSTAFDIRFNPDIFSPGVRFPESCQDEV-RDQKQLLKDAAAFLLSCQIPGLVKDCMEHAVLPVDGATLAEVMRQRGINMRYLGKVLELVLRSPARHQLDHVFKIGIGELITRSAKHIFKTYLQGVELSGLSAAISHFLNCFLSSYPNPVAHLPADELVSKKRNKRRKNRPPG--AADNTAWAVMTPQELWKNICQEAKNYFDFDLECETVDQAVETYGLQKITLLREISLKTGIQVLLKEYSFDSRHKPAFTEEDVLNIFPVVKHVNPKASDAFHFFQSGQAKVQQGFLKEGCELINEALNLFNNVYGAMHVETCACLRLLARLHYIMGDYAEALSNQQKAVLMSERVMGTEHPNTIQEYMHLALYCFASSQLSTALSLLYRARYLMLLVFGEDHPEMALLDNNIGLVLHGVMEYDLSLRFLENALAVSTKYHGPKALKVALSHHLVARVYESKAEFRSALQHEKEGYTIYKTQLGEDHEKTKESSEYLKCLTQQAVALQRTMNEIYRNG 1215          
The following BLAST results are available for this feature:
BLAST of TCONS_00017832-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CLU0.000e+043.98Clustered mitochondria protein homolog OS=Homo sap... [more]
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