TCONS_00017713-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00017713-protein
Unique NameTCONS_00017713-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length759

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00017713-protein ID=TCONS_00017713-protein|Name=TCONS_00017713-protein|organism=Clytia hemisphaerica|type=polypeptide|length=759bp
MVYSLILYFIFLEAITMSQIINSGSISCKSCGVCQKLLKHFQQHISTIHI
LTGAEGVIGNAILNLLTLLIPEGPNHELKQLNRTVPVISKPPEKHIQNIE
PEPTTEVINKNVIQSYSGDFAASSVPNASQQEMHPGLIPITVSDKPRDQQ
MKVAQIPQGFIEFPFMVPQSSEMQNESTLTNSLVNSDGTLTQMGLQLLFS
NQSNRGNMSGKSDLDDVADILVNKMPIPSLKVLESSNLQTLYLHQLALSQ
LQQALTNNTETSDTQQEMVIKDTSTTPSNKKQQPSVNSSSFESILERHKY
INEMIEEMNAKSKTTNQQSSSSKHGGSTRFSADANILTFSKSAIKPSNVI
QTVPSISSALSKQNIDILTGTTTARKGHVPVLLATGDPSLLSIPKDISQD
NQPAEEEEVHFTREKKEDSSINLQHLHSLILETSKRLQEGLQPMKLEVEQ
PPPPPPPEPQNINVAISQGASSGSSKMPVTLQGIIIDPTNNKHENEELVS
PNSQVENIDVTGDEDGENRGKTYSGLNTVGEQPQYQAENKLYKCDLCGVP
FSVYSTLQAHIKSAHKEKVEFCSFCQMSFKSMEDYYVHVAAHENAFNCQF
CDKVFTSSGDYKKHLSRHTHRRPYSCYHCQKSFRDPGSLAKHERIHTGEH
PFVCETCGRGFAEKSSLSKHKRVHSGEKPYKCELCDKSFSISGNLQRHML
IHTGKRPFKCTVCNKAFNNQSHLRRHIRNLHTAKGEDAKVGLVVPRAVSD
EEMKDESVQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_009913XLOC_009913Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00017713TCONS_00017713Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 26..49
e-value: 81.0
score: 5.2
coord: 542..565
e-value: 0.026
score: 23.7
coord: 708..731
e-value: 3.7E-5
score: 33.1
coord: 570..592
e-value: 1.9
score: 17.5
coord: 624..646
e-value: 0.004
score: 26.4
coord: 680..702
e-value: 1.0E-4
score: 31.7
coord: 652..674
e-value: 0.0036
score: 26.5
coord: 596..618
e-value: 0.001
score: 28.3
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 654..674
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 682..702
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 710..731
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 626..646
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 544..565
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 598..620
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 652..679
score: 17.516
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 596..623
score: 12.424
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 624..651
score: 15.521
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 680..707
score: 15.833
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 542..570
score: 10.907
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 708..736
score: 13.921
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 596..646
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 632..689
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 674..726
IPR013087Zinc finger C2H2-typeSUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 540..592
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 708..731
e-value: 1.5E-6
score: 28.2
coord: 652..674
e-value: 6.1E-4
score: 20.0
coord: 680..702
e-value: 1.7E-5
score: 24.9
coord: 596..618
e-value: 5.6E-4
score: 20.1
coord: 542..565
e-value: 0.0013
score: 19.0
coord: 624..646
e-value: 2.9E-4
score: 21.0
NoneNo IPR availableGENE3D2.20.28.30coord: 663..686
e-value: 4.4E-17
score: 61.5
NoneNo IPR availableGENE3D2.20.25.10coord: 701..714
e-value: 5.3E-6
score: 25.9
NoneNo IPR availableGENE3D3.30.160.60coord: 288..552
e-value: 1.0E-4
score: 22.0
NoneNo IPR availableGENE3D3.30.160.60coord: 715..756
e-value: 9.4E-11
score: 41.0
NoneNo IPR availableGENE3D2.20.28.30coord: 635..662
e-value: 8.4E-19
score: 67.2
NoneNo IPR availableGENE3D3.30.160.60coord: 581..607
e-value: 1.8E-7
score: 30.7
coord: 608..634
e-value: 3.8E-14
score: 52.1
coord: 553..580
e-value: 9.2E-9
score: 34.8
NoneNo IPR availableGENE3D3.30.160.60coord: 687..700
e-value: 9.2E-14
score: 50.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 258..292
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 446..476
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 310..329
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 507..527

Blast
BLAST of TCONS_00017713-protein vs. Swiss-Prot (Human)
Match: ZBT17 (Zinc finger and BTB domain-containing protein 17 OS=Homo sapiens GN=ZBTB17 PE=1 SV=3)

HSP 1 Score: 171.4 bits (433), Expect = 1.840e-44
Identity = 85/248 (34.27%), Postives = 127/248 (51.21%), Query Frame = 0
Query:  517 ENRGKTYSGLNTVGEQPQYQAENKLYKCDLCGVPFSVYSTLQAHIKSAHKEKVEFCSFCQMSFKSMEDYYVHVAAH--ENAFNCQFCDKVFTSSGDYKKHLSRHTHRRPYSCYHCQKSFRDPGSLAKHERIHTGEHPFVCETCGRGFAEKSSLSKHKRVHSGEKPY----------------------------KCELCDKSFSISGNLQRHMLIHTGKRPFKCTVCNKAFNNQSHLRRHIRNLHTAK 734
            E+ GK ++    +       +  K Y+CD CG  FS  ++   H+++   +K   C  C   F  + +   H+  H  +    C+ C K FT+SG+ K+HL  H+  +PY C HCQ+ F DPG+L +H RIHTGE P  C  CG+ F + SSL  H R H+GEKPY                            KC +C K+F   G+L +H++IHTG++P+ C  C + FN   +LR H++ +H  K
Sbjct:  393 EDCGKLFTTSGNLKRHQLVHSGEKPYQCDYCGRSFSDPTSKMRHLETHDTDKEHKCPHCDKKFNQVGNLKAHLKIHIADGPLKCRECGKQFTTSGNLKRHLRIHSGEKPYVCIHCQRQFADPGALQRHVRIHTGEKPCQCVMCGKAFTQASSLIAHVRQHTGEKPYVCERCGKRFVQSSQLANHIRHHDNIRPHKCSVCSKAFVNVGDLSKHIIIHTGEKPYLCDKCGRGFNRVDNLRSHVKTVHQGK 640          

HSP 2 Score: 136.346 bits (342), Expect = 5.016e-33
Identity = 57/137 (41.61%), Postives = 89/137 (64.96%), Query Frame = 0
Query:  598 CQFCDKVFTSSGDYKKHLSRHTHRRPYSCYHCQKSFRDPGSLAKHERIHTGEHPFVCETCGRGFAEKSSLSKHKRVHSGEKPYKCELCDKSFSISGNLQRHMLIHTGKRPFKCTVCNKAFNNQSHLRRHIRNLHTAK 734
            C+ C K FT +G++K+H+  HT  +P+SC  C K+F DP +   HE+ H+   P+ CE CG+ +   S L+ HK+ HSGE  Y+CE C K F+ SGNL+RH L+H+G++P++C  C ++F++ +   RH+    T K
Sbjct:  308 CEDCGKEFTHTGNFKRHIRIHTGEKPFSCRECSKAFSDPAACKAHEKTHSPLKPYGCEECGKSYRLISLLNLHKKRHSGEARYRCEDCGKLFTTSGNLKRHQLVHSGEKPYQCDYCGRSFSDPTSKMRHLETHDTDK 444          

HSP 3 Score: 134.42 bits (337), Expect = 2.269e-32
Identity = 70/220 (31.82%), Postives = 113/220 (51.36%), Query Frame = 0
Query:  517 ENRGKTYSGLNTVGEQPQYQAENKLYKCDLCGVPFSVYSTLQAHIKSAHKEKVEFCSFCQMSFKSMEDYYVHVAAH--ENAFNCQFCDKVFTSSGDYKKHLSRHTHRRPYSCYHCQKSFRDPGSLAKHERIHTGEHPFVCETCGRGFAEKSSLSKHKRVHSGEKPYKCELCDKSFSISGNLQRHMLIHTGKRPFKCTVCNKAFNNQSHLRRHIRNLHTAK 734
            E+ GK ++         +     K + C  C   FS  +  +AH K+    K   C  C  S++ +    +H   H  E  + C+ C K+FT+SG+ K+H   H+  +PY C +C +SF DP S  +H   H  +    C  C + F +  +L  H ++H  + P KC  C K F+ SGNL+RH+ IH+G++P+ C  C + F +   L+RH+R +HT +
Sbjct:  309 EDCGKEFTHTGNFKRHIRIHTGEKPFSCRECSKAFSDPAACKAHEKTHSPLKPYGCEECGKSYRLISLLNLHKKRHSGEARYRCEDCGKLFTTSGNLKRHQLVHSGEKPYQCDYCGRSFSDPTSKMRHLETHDTDKEHKCPHCDKKFNQVGNLKAHLKIHIADGPLKCRECGKQFTTSGNLKRHLRIHSGEKPYVCIHCQRQFADPGALQRHVR-IHTGE 527          
The following BLAST results are available for this feature:
BLAST of TCONS_00017713-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZBT171.840e-4434.27Zinc finger and BTB domain-containing protein 17 O... [more]
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