TCONS_00017643-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00017643-protein
Unique NameTCONS_00017643-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length371

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00017643-protein ID=TCONS_00017643-protein|Name=TCONS_00017643-protein|organism=Clytia hemisphaerica|type=polypeptide|length=371bp
LGIKESDTGLAPPAMWDLAADKQTLHSEQPLQVARCTKIINADSDDPKYI
INVKQFAKFVVDLGDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVT
MMQVEEKPDVTYADVGGCKEQIDKLREVVETPLLHPERFVNLGIDPPKGV
LCYGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFE
MARSKKACIIFFDEIDAVGGARFDDGAGGDNEVQRTMLELINQLDGFDPR
GNIKVLMATNRPDTLDPALTRPGRLDRKVEFSLPDLEGRAHIFKIHARSM
SVDRDIRYELLARLCPNSTGAEIRSVCTEAGMFAIRERRKVATEKDFLSA
IQKVIKAYAKFSATPKYMTYN
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_009860XLOC_009860Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00017643TCONS_00017643Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003593AAA+_ATPase
IPR003959ATPase_AAA_core
IPR00593726S_Psome_P45
IPR003960ATPase_AAA_CS
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0016787hydrolase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0030163protein catabolic process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030163 protein catabolic process
cellular_component GO:0005737 cytoplasm
molecular_function GO:0005524 ATP binding
molecular_function GO:0016787 hydrolase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 146..285
e-value: 3.3E-19
score: 79.8
IPR003959ATPase, AAA-type, corePFAMPF00004AAAcoord: 150..282
e-value: 1.5E-39
score: 135.3
NoneNo IPR availableGENE3D3.40.50.300coord: 93..295
e-value: 1.5E-57
score: 194.3
NoneNo IPR availableGENE3D1.10.8.60coord: 296..355
e-value: 1.4E-19
score: 69.5
NoneNo IPR availableCDDcd00009AAAcoord: 116..283
e-value: 2.68773E-26
score: 101.454
IPR00593726S proteasome subunit P45TIGRFAMTIGR01242TIGR01242coord: 44..354
e-value: 1.6E-122
score: 407.2
IPR003960ATPase, AAA-type, conserved sitePROSITEPS00674AAAcoord: 253..271
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 108..360

Blast
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BLAST of TCONS_00017643-protein vs. Swiss-Prot (Human)
Match: PRS7 (26S proteasome regulatory subunit 7 OS=Homo sapiens GN=PSMC2 PE=1 SV=3)

HSP 1 Score: 729.939 bits (1883), Expect = 0.000e+0
Identity = 346/370 (93.51%), Postives = 362/370 (97.84%), Query Frame = 0 
Query:    2 GIKESDTGLAPPAMWDLAADKQTLHSEQPLQVARCTKIINADSDDPKYIINVKQFAKFVVDLGDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYADVGGCKEQIDKLREVVETPLLHPERFVNLGIDPPKGVLCYGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSKKACIIFFDEIDAVGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALTRPGRLDRKVEFSLPDLEGRAHIFKIHARSMSVDRDIRYELLARLCPNSTGAEIRSVCTEAGMFAIRERRKVATEKDFLSAIQKVIKAYAKFSATPKYMTYN 371
            GIKESDTGLAPPA+WDLAADKQTL SEQPLQVARCTKIINADS+DPKYIINVKQFAKFVVDL DQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTY+DVGGCKEQI+KLREVVETPLLHPERFVNLGI+PPKGVL +GPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMAR+KKAC+IFFDEIDA+GGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPAL RPGRLDRK+EFSLPDLEGR HIFKIHARSMSV+RDIR+ELLARLCPNSTGAEIRSVCTEAGMFAIR RRK+ATEKDFL A+ KVIK+YAKFSATP+YMTYN
Sbjct:   64 GIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSYAKFSATPRYMTYN 433
The following BLAST results are available for this feature:
BLAST of TCONS_00017643-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PRS70.000e+093.5126S proteasome regulatory subunit 7 OS=Homo sapien... [more]
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