TCONS_00017603-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00017603-protein
Unique NameTCONS_00017603-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length820

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00017603-protein ID=TCONS_00017603-protein|Name=TCONS_00017603-protein|organism=Clytia hemisphaerica|type=polypeptide|length=820bp
MGQYFVFYTCWLLLFGQLLFWKCSFAQKNSQKAQDKQPSLDPSKHSFRMS
KIARQHLSDEKNPNNFPKLLGVDFPGCKAHTLYDQESDLTKLVKSFGTDY
DTTTIQELSQGFQILGMCHPEQSFEVFDAIVQTFPGALFGYIGRGISAVR
LANKIKASSESAMKDFAHVIKQKPNFYLPYRCRAELHYLTGNYEDALKDA
EKDLHFKHDGSAYVMAGIISYKLEKDNQAVQYLKMAQKFVNGNNAISYEY
LGLSYLNMGMLRNAVDALKNSLEYEGENLNVWQTIGTIYSELGDPALAHV
FLDKALAMKADDTKTLELKGHVYFSNGHPKEAVKWYQSCMRNDPTQTSCM
FMRAVSYASIGQFYKAVKVMTRVMLSSTCNQEYKEPLYLRDFYRYLNHRL
DTPLVTYRFDEDLPENYRFIWARKVLPNHFNYTEQPGIEPHIIDVEDVSF
QELPNDTKILLCKARDLSDLLQYRADGFMPNTRSNKAMALAALDVAQTIQ
SYWNNPKTKKGWKGRSFSWRDIFEVAVKWRKLVSMDQPVIWLDQLPKQIV
DAGFITHMIMKKGYVEMPRYSSYTVEALQLAKFMIRSLLGQKLPAKAQDL
VMKAVSPTDILHILRKYDGANQNGAFTVGMQVPSSRSKGALLNSVMLSIV
GQNEEDITLSIQSARTSQQIFQYHAELSHVFNELRDDVIKKKSRNSGKDN
DVATTNLVLQLVYYFYNLLPLSRGTSAISYSVAMGMFLAIDKELTSRIPV
EKQPDIEAYFAGSSEAFIKKIRSWLKFKNAQVSISKYPDVTNTFYSSRTV
LEALNADFTEEQCKPYRLHQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_009841XLOC_009841Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00017603TCONS_00017603Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom
IPR013026TPR-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 177..209
e-value: 330.0
score: 1.7
coord: 210..243
e-value: 44.0
score: 9.3
coord: 279..312
e-value: 21.0
score: 12.1
coord: 313..346
e-value: 0.23
score: 20.5
coord: 245..278
e-value: 0.12
score: 21.4
IPR019734Tetratricopeptide repeatPFAMPF13181TPR_8coord: 316..345
e-value: 0.033
score: 14.3
coord: 280..311
e-value: 0.085
score: 13.0
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 245..278
score: 8.437
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 313..346
score: 8.614
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 279..312
score: 7.641
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 210..243
score: 5.222
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 333..501
e-value: 3.1E-7
score: 29.9
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 103..201
e-value: 1.3E-5
score: 24.5
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 202..249
e-value: 0.035
score: 13.6
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 250..332
e-value: 8.3E-17
score: 60.6
IPR011990Tetratricopeptide-like helical domainSUPERFAMILY48452TPR-likecoord: 212..373
IPR011990Tetratricopeptide-like helical domainSUPERFAMILY48452TPR-likecoord: 110..238
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 210..380
score: 25.093
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 160..210
score: 6.633

Blast
[Close]
BLAST of TCONS_00017603-protein vs. Swiss-Prot (Human)
Match: TTC13 (Tetratricopeptide repeat protein 13 OS=Homo sapiens GN=TTC13 PE=2 SV=3)

HSP 1 Score: 415.231 bits (1066), Expect = 2.273e-132
Identity = 238/729 (32.65%), Postives = 403/729 (55.28%), Query Frame = 0 
Query:   96 FGTDYDTTTIQELSQGFQILGMCHPEQSFEVFDAIVQTFPGALFGYIGRGISAVRLANKIKASSESAMKDFAHVIKQKPNFYLPYRCRAELHYLTGNYEDALKDAEKDLH-------FKHDGSAYVMAGIISYKLEKDNQAVQYLKMAQKFVNGNNAISYEYLGLSYLNMGMLRNAVDALKNSLEYEGENLNVWQTIGTIYSELGDPALAHVFLDKALAMKADDTKTLELKGHVYFSNGHPKEAVKWYQSCMRNDPTQTSCMFMRAVSYASIGQFYKAVKVMTRVMLS-----STCNQEYKEPLYLRDFYRYLNHRLDTPLVTYRFDEDLPENYRFIWARKVLPNHFNYTEQPGIEPHIIDVEDVSFQELPNDTKILLCKARDLSDLLQYRADGFMPNTRSNKAMALAALDVAQTIQSYWNNPKTKKGWKGRSFSWRDIFEVAVKWRKLVSMDQPVIWLDQLPKQIVDAGFITHMIMKKGYVEMPRYSSYTVEALQLAKFMIRSLLGQKLPA---KAQDLVMKAVSPTDILHILRKYDGANQNGAFTVGMQVPSSRSKGALLNSVMLSIVGQNEEDITLSIQSARTSQQIFQYHAELSHVFNEL--RDDVIKKKSRNSGKDNDVATTNLVLQLVYYFYNLLPLSRGTSAISYSVAMGMFLAIDKELTSRIPVEKQPDIEAYFAGSSEAFIKKIRSWLKFKNAQVSISKYPDVTNTFYSSRTVLEALNAD 807
            F TD D+T  +EL+  + ++G    +++   F  ++Q  P  +    GRGI+  +       ++E A+ + + VI  +P+    +  RAE+    G   +A+ D  K +        ++H G+ Y ++   +   E   Q+++        +N N  I+  Y GL++ + G+L+ A+++ K +L+ + + ++ ++++G  Y ELG+   A     KAL +  +  +TL+L+G + + +G  +EA+K ++ C++ +P    C +M+ +S+ ++GQFY+ +K  T+VML+        + EY +  YLR++ RYL+  LDTPL  Y  D DLP +++  WA+ +     +Y EQPG++PHI DV   +F+    + + L+C A  L  L+QY   GF+PN R ++AM LAAL+V Q +Q  W N K +   K R   WRD+F++AVKWR++   DQPV+WLDQ+P + +  GF  H+ + +G V   RY  Y  + L   K  I    G   P    + ++ + K     D+L I+++++   ++G FTV  +VPS + +G   +   ++I G    +I  S+++  T ++   YHAE+  ++ +L  +  V+   S     D   A  NL+L LVYYFYNL+PLSRG+S I+YSV +G  +A  KE+  +IP  K  D EA  A  SEAF K  +SW+  K+   S    P V+ TF + R+++E LN D
Sbjct:  136 FATDNDSTN-EELAIAYVLIGSGLYDEAIRHFSTMLQEEPDLVSAIYGRGIAYGKKGLHDIKNAELALFELSRVITLEPDRPEVFEQRAEILSPLGRINEAVNDLTKAIQLQPSARLYRHRGTLYFISEDYATAHEDFQQSLE--------LNKNQPIAMLYKGLTFFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATESFQKALLLNQNHVQTLQLRGMMLYHHGSLQEALKNFKRCLQLEPYNEVCQYMKGLSHVAMGQFYEGIKAQTKVMLNDPLPGQKASPEYLKVKYLREYSRYLHAHLDTPLTEYNIDVDLPGSFKDHWAKNLPFLIEDYEEQPGLQPHIKDVLHQNFESYKPEVQELICVADRLGSLMQYETPGFLPNKRIHRAMGLAALEVMQAVQRTWTNSKVRMNGKTRLMQWRDMFDIAVKWRRIADPDQPVLWLDQMPARSLSRGFNNHINLIRGQVINMRYLEYFEKILHFIKDRILVYHGANNPKGLLEVREALEKVHKVEDLLPIMKQFNTKTKDG-FTVNTKVPSLKDQGKEYDGFTITITGDKVGNILFSVETQTTEERTQLYHAEIDALYKDLTAKGKVLILSSEFGEAD---AVCNLILSLVYYFYNLMPLSRGSSVIAYSVIVGALMASGKEVAGKIPKGKLVDFEAMTAPGSEAFSKVAKSWMNLKSISPSYKTLPSVSETFPTLRSMIEVLNTD 851
The following BLAST results are available for this feature:
BLAST of TCONS_00017603-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TTC132.273e-13232.65Tetratricopeptide repeat protein 13 OS=Homo sapien... [more]
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