TCONS_00017566-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00017566-protein
Unique NameTCONS_00017566-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length162

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00017566-protein ID=TCONS_00017566-protein|Name=TCONS_00017566-protein|organism=Clytia hemisphaerica|type=polypeptide|length=162bp
MYAASARRNSFLNPGNQPTVADFIEPEVFDPADDRIITLNISGRRFQTWE
NTLRRFPDSLLGNAERRSRYYREEMKEYFFDRHRPTFESILYFYQSKGIM
AKPPNIPVHVFINELIFFDIGDDVISKLQLDNGLKEPEKIEEEPDNWLFK
VVWQFLENPQSS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_009823XLOC_009823Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00017566TCONS_00017566Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028325VG_K_chnl
IPR000210BTB/POZ_dom
IPR003131T1-type_BTB
IPR011333SKP1/BTB/POZ
Vocabulary: Biological Process
TermDefinition
GO:0006813potassium ion transport
GO:0051260protein homooligomerization
Vocabulary: Molecular Function
TermDefinition
GO:0005249voltage-gated potassium channel activity
GO:0005515protein binding
Vocabulary: Cellular Component
TermDefinition
GO:0008076voltage-gated potassium channel complex
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006813 potassium ion transport
biological_process GO:0051260 protein homooligomerization
cellular_component GO:0008076 voltage-gated potassium channel complex
molecular_function GO:0005515 protein binding
molecular_function GO:0005249 voltage-gated potassium channel activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR028325Voltage-gated potassium channelPRINTSPR00169KCHANNELcoord: 159..162
score: 9.1
coord: 77..96
score: 60.93
IPR000210BTB/POZ domainSMARTSM00225BTB_4coord: 35..135
e-value: 8.2E-5
score: 32.0
IPR003131Potassium channel tetramerisation-type BTB domainPFAMPF02214BTB_2coord: 37..126
e-value: 4.4E-25
score: 87.8
NoneNo IPR availableGENE3D3.30.710.10coord: 34..134
e-value: 2.3E-17
score: 62.5
IPR011333SKP1/BTB/POZ domainSUPERFAMILY54695POZ domaincoord: 36..129

Blast
[Close]
BLAST of TCONS_00017566-protein vs. Swiss-Prot (Human)
Match: KCNA7 (Potassium voltage-gated channel subfamily A member 7 OS=Homo sapiens GN=KCNA7 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 2.101e-31
Identity = 52/126 (41.27%), Postives = 83/126 (65.87%), Query Frame = 0 
Query:   37 ITLNISGRRFQTWENTLRRFPDSLLGNAERRSRYYREEMKEYFFDRHRPTFESILYFYQSKGIMAKPPNIPVHVFINELIFFDIGDDVISKLQLDNGLKEPEKIEEEPDNWLFKVVWQFLENPQSS 162
            + LN++G RF+T   TL RFPD+LLG+  RR R+Y +  +EYFFDRHRP+F+++LY+YQS G + +P ++P+ VF+ E+ F+ +G   +++L+ D G   P +    P     + +W   E P+SS
Sbjct:   15 LVLNVAGLRFETRARTLGRFPDTLLGDPARRGRFYDDARREYFFDRHRPSFDAVLYYYQSGGRLRRPAHVPLDVFLEEVAFYGLGAAALARLREDEGCPVPPE-RPLPRRAFARQLWLLFEFPESS 139
The following BLAST results are available for this feature:
BLAST of TCONS_00017566-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
KCNA72.101e-3141.27Potassium voltage-gated channel subfamily A member... [more]
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