TCONS_00017552-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00017552-protein
Unique NameTCONS_00017552-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length162

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00017552-protein ID=TCONS_00017552-protein|Name=TCONS_00017552-protein|organism=Clytia hemisphaerica|type=polypeptide|length=162bp
MCWDEYSSKLFVGNSKGLIMGFAVGFAAFHKLEVIRKAGDPIVQMDVCNG
KLVVSSTTKAILCLLERSQFCQIGTKPRDGLYGTCFLKARPENQPVIYSA
RPGSRLWEVDFNGQVLATHQFKESLSTPPTPLVTSRELKFHPSNTVWNSP
QGFNFPKLCPLM
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_009810XLOC_009810Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00017552TCONS_00017552Clytia hemisphaericatranscript
Blast
[Close]
BLAST of TCONS_00017552-protein vs. Swiss-Prot (Human)
Match: HPS5 (Hermansky-Pudlak syndrome 5 protein OS=Homo sapiens GN=HPS5 PE=1 SV=2)

HSP 1 Score: 132.494 bits (332), Expect = 2.221e-36
Identity = 71/174 (40.80%), Postives = 101/174 (58.05%), Query Frame = 0 
Query:    1 MCWDEYSSKLFVGNSKGLIMGF----------AVGFAAFHKLEVIRKAGDPIVQMDVCNGKLVVSSTTKAILCLLERSQFCQIGTKPRDGLYGTCFLKARPE--NQPVIYSARPGSRLWEVDFNGQVLATHQFKESLSTPPTPLVTSRELKFHPS-NTVWNSPQGFNFPKLCPL 161
            +CWD    ++FVG+  G +             A  F  F  ++ I      +VQ+D  +G+L++SS T++ LC  ER +F +IG K RDG YG CF   R     QP+IY ARPGSR+WEV+F+G+V++THQFK+ LS PP P++T   L+  P  +    S Q  +FPKL  L
Sbjct:  129 LCWDTAILRVFVGDHAGKVSAIKLNTSKQAKAAAAFVMF-PVQTITTVDSCVVQLDYLDGRLLISSLTRSFLCDTEREKFWKIGNKERDGEYGACFFPGRCSGGQQPLIYCARPGSRMWEVNFDGEVISTHQFKKLLSLPPLPVIT---LRSEPQYDHTAGSSQSLSFPKLLHL 298
The following BLAST results are available for this feature:
BLAST of TCONS_00017552-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
HPS52.221e-3640.80Hermansky-Pudlak syndrome 5 protein OS=Homo sapien... [more]
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