TCONS_00017359-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00017359-protein
Unique Name	TCONS_00017359-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	462

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00017359-protein ID=TCONS_00017359-protein|Name=TCONS_00017359-protein|organism=Clytia hemisphaerica|type=polypeptide|length=462bp
MAASQIRIKWSNFSTSQPSVRLFCQLISNYSNKEMFSRPSSGESSRPSSI
TRSIRGSFSSGLEVLPPDFRDVTTPLEIEVVEHDDTNDFSEVEKAVCRSS
IADKEVKKDTNDTTAPKKEETELERKIRKGLKKIEKLDKILTDKIEKERE
VKRERFALERDFQTQIQTLIQEKGVENIVGSQQLLSLCAATDLKRNEDCD
DDFTNQIFSTQIDSQFYEKRNSSSQSNDPSEDVENDSNTEKKSKKDKNFI
RRNIHLASHFNETVALTDEEKKRLEELLSDDTDLLIGENPFSTPAIKDDG
FRFSINDQKLIEDIDLQLKEFLSEEEYNSAMLSESQTTVSSMTSTRFDEE
FASVEGLAACGEKVLNEGHDQRNMVQRLNAIEEKLQQLRLTADSPTYEKI
DPDLLRSLLNVDSRMTSDSRSICDSVRTNSEICFEGDENCTDVSIDVSYD
PRESVISQNEDD

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_009718	XLOC_009718	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00017359	TCONS_00017359	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR026246	Fsip1

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 371..391
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 217..245
IPR026246	Fibrous sheath-interacting protein 1	PRINTS	PR02075	FIBSHEATHIP1	coord: 310..328 score: 21.93 coord: 264..281 score: 54.63 coord: 130..152 score: 45.65 coord: 244..264 score: 40.48
IPR026246	Fibrous sheath-interacting protein 1	PFAM	PF15554	FSIP1	coord: 45..389 e-value: 3.2E-43 score: 148.2

Blast

[Close]

BLAST of TCONS_00017359-protein vs. Swiss-Prot (Human)
Match: FSIP1 (Fibrous sheath-interacting protein 1 OS=Homo sapiens GN=FSIP1 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 1.087e-17
Identity = 84/301 (27.91%), Postives = 148/301 (49.17%), Query Frame = 0

Query:  122 ELERKIRKGLKKIEKLDKILTDKIEKEREVKRERFALERDFQTQIQTLIQEKGV---ENIVGSQQLLSLCAATD--LKRNEDCDDDFTNQIFSTQIDSQFYEKRNSSSQSNDPSEDVEND-----------SNTEK---KSKKDKNFIRRNIHLASHFNETVALTDEEKKRLEELLSD----DTDLLIGENPFSTPAIKDDGFRFSINDQKLIEDIDLQLKEFLSEEEYNSAMLSESQTTVSSMTST----------RFDEEFASVEGLAACGEKVLNEGHDQRNMVQRLNAIEEKLQQLR 389
            EL+ +++  ++K++KLDKIL  K  +E+E+K++   +      +I++    +     E +  +++ LSL A ++  +  + + +D F++ +F TQI  + YE +     + D + DVE +           SNTEK   + K +++FI+RNI LA      V + D EKKRL ELL D    D+ L   E   S   +   G+  ++   + + +ID++L+E           LS +  T+SS +            R  E    V      GEK+L    +QR++  RL  I+EKL+ ++
Sbjct:  110 ELDSQLQDAIQKMKKLDKILAKKQRREKEIKKQGLEMRIKLWEEIKSAKYSEAWQSKEEMENTKKFLSLTAVSEETVGPSHEEEDTFSS-VFHTQIPPEEYEMQ-MQKLNKDFTCDVERNESLIKSGKKPFSNTEKIELRGKHNQDFIKRNIELAKESRNPVVMVDREKKRLVELLKDLDEKDSGLSSSEGDQSGWVVPVKGYELAVTQHQQLAEIDIKLQE-----------LSAASPTISSFSPRLENRNNQKPDRDGERNMEV----TPGEKILRNTKEQRDLHNRLREIDEKLKMMK 393

The following BLAST results are available for this feature:

BLAST of TCONS_00017359-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00017359-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
FSIP1	1.087e-17	27.91	Fibrous sheath-interacting protein 1 OS=Homo sapie...	[more]

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TCONS_00017359-protein (polypeptide) - C. hemisphaerica