TCONS_00017334-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00017334-protein
Unique NameTCONS_00017334-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length635

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00017334-protein ID=TCONS_00017334-protein|Name=TCONS_00017334-protein|organism=Clytia hemisphaerica|type=polypeptide|length=635bp
MADDIGGKLNLTQIRNLVRQYIDIHLYDSALFWADKVCTLSKNDQKDVIW
LAHCLFLSKQPLRAAQLLKSKGLTSTNLLGRYLAAKCFVECKEWRSALDV
LDGEEQELKTTFKESINTNPLISTSTSTAADDDGEFSAIISSSLSLPYAG
SSKSRKLEAAVSLLKGTVYEALENRQIATQCFKDALQHDIYCFEAFNLLV
SHHSLTSAEENQLLESLPYNTQCNEEEAKLLRFVYKNLINKYSKPVEELL
PPVLQPMTGNLDYIVSLAEKYFNNSNFREALRYTKYVLKVDNLHEGCLPL
YISCLSILKMTNELYNLAHRLVNTYPTRSVSWYAIGSYYLMIKKNESARK
YFGKATSINNTYGPAWLGFAHSFSSDGEKDQAISAYFSASQYMPGSHLPF
LNLGREYAQSHDLKLAMKFYKEAMSIAPHDPHIKLELGTLAYENGEYQKA
ESLLLDCLKKVSHVENDPNTFVDIWEPLFNNLGHVMRKLGKYEDALDYHK
QAYQMAPKNSGTCAAMGLCYLLASKYTEAVSILHKALSLKRDDTLSMQLL
NEALKSLSAIESSNIENIDPLEESLEQSNATKQSISILSMKDSSVIDADE
TSDFDGCKTTNMSDVMEMESTMEDCSNMSLEMSDL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_009706XLOC_009706Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00017334TCONS_00017334Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom
IPR013026TPR-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 510..543
e-value: 0.24
score: 20.5
coord: 329..362
e-value: 1.1
score: 18.3
coord: 363..396
e-value: 30.0
score: 10.8
coord: 431..464
e-value: 75.0
score: 7.3
coord: 476..509
e-value: 5.9E-4
score: 29.1
coord: 159..192
e-value: 27.0
score: 11.2
coord: 397..430
e-value: 0.026
score: 23.7
coord: 261..294
e-value: 61.0
score: 8.1
IPR019734Tetratricopeptide repeatPFAMPF13181TPR_8coord: 331..360
e-value: 0.0063
score: 16.5
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 159..192
score: 5.546
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 261..294
score: 6.284
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 476..509
score: 11.328
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 510..543
score: 8.172
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 397..430
score: 9.912
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 363..396
score: 6.372
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 329..362
score: 8.172
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 4..215
e-value: 2.8E-7
score: 29.3
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 446..589
e-value: 8.8E-21
score: 73.8
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 255..354
e-value: 7.9E-10
score: 38.0
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 385..445
e-value: 2.0E-10
score: 40.1
IPR011990Tetratricopeptide-like helical domainSUPERFAMILY48452TPR-likecoord: 261..543
IPR011990Tetratricopeptide-like helical domainSUPERFAMILY48452TPR-likecoord: 159..196
coord: 17..102
coord: 244..291
NoneNo IPR availableGENE3D1.20.58.280coord: 355..384
e-value: 0.0011
score: 18.4
NoneNo IPR availablePFAMPF12895ANAPC3coord: 25..102
e-value: 3.2E-18
score: 65.6
NoneNo IPR availablePFAMPF14559TPR_19coord: 410..454
e-value: 6.4E-6
score: 26.5
coord: 489..549
e-value: 1.7E-7
score: 31.6
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 261..543
score: 34.322

Blast
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BLAST of TCONS_00017334-protein vs. Swiss-Prot (Human)
Match: CDC16 (Cell division cycle protein 16 homolog OS=Homo sapiens GN=CDC16 PE=1 SV=2)

HSP 1 Score: 494.582 bits (1272), Expect = 1.733e-168
Identity = 246/548 (44.89%), Postives = 357/548 (65.15%), Query Frame = 0 
Query:    9 LNLTQIRNLVRQYIDIHLYDSALFWADKVCTLSKNDQKDVIWLAHCLFLSKQPLRAAQLLKSKGLTSTNLLGRYLAAKCFVECKEWRSALDVLDGEEQELKTTFKESINTNPLISTSTSTAADDDGEFSAIISSSLSLPYAGSSKSRKLEAAVSLLKGTVYEALENRQIATQCFKDALQHDIYCFEAFNLLVSHHSLTSAEENQLLESLPYNTQCNEEEAKLLRFVYKNLINKYSKPVEELLPPVLQPMTGNLDYIVSLAEKYFNNSNFREALRYTKYVLKVDNLHEGCLPLYISCLSILKMTNELYNLAHRLVNTYPTRSVSWYAIGSYYLMI-KKNESARKYFGKATSINNTYGPAWLGFAHSFSSDGEKDQAISAYFSASQYMPGSHLPFLNLGREYAQSHDLKLAMKFYKEAMSIAPHDPHIKLELGTLAYENGEYQKAESLLLDCLKKVSHVENDPNTFVDIWEPLFNNLGHVMRKLGKYEDALDYHKQAYQMAPKNSGTCAAMGLCYLLASKYTEAVSILHKALSLKRDDTLSMQLLNEALK 555
            +NL ++R  VRQY+D   Y SALFWADKV +LS+ + +D+ WLA CL+L+ Q  RAA  L+S+ L       RYLAA+C    KE + ALDVLD EE   K  F++ +         +S     D E S                   +++++ LL+G +Y+AL+NR +AT  +K+AL+ D+YCFEAF+LL SHH LT+ EE +LLESLP +  CNEE+ +LLRF+++N + KY+KP E ++P  +  +  NLD +VSLAE+++ N +F+   + T  V++ D  H  CLP++I  L  L   NEL+ L+H+LV+ YP+  VSW+A+G YYLM+  KNE AR+Y  KAT++  TYGPAW+ + HSF+ + E DQA++AYF+A+Q M G HLP L +G EY  +++ KLA +F+ +A+SIAP DP +  E+G +A++NGE++ AE   LD L+K+  + N+    VD WEPL NNLGHV RKL KY +ALDYH+QA  + P+N+ T +A+G  + L   +  AV   H AL L+RDDT S+ +L   ++
Sbjct:    1 MNLERLRKRVRQYLDQQQYQSALFWADKVASLSREEPQDIYWLAQCLYLTAQYHRAAHALRSRKLDKLYEACRYLAARCHYAAKEHQQALDVLDMEEPINKRLFEKYLKDESGFKDPSS-----DWEMS----------------QSSIKSSICLLRGKIYDALDNRTLATYSYKEALKLDVYCFEAFDLLTSHHMLTAQEEKELLESLPLSKLCNEEQ-ELLRFLFENKLKKYNKPSETVIPESVDGLQENLDVVVSLAERHYYNCDFKMCYKLTSVVMEKDPFHASCLPVHIGTLVELNKANELFYLSHKLVDLYPSNPVSWFAVGCYYLMVGHKNEHARRYLSKATTLEKTYGPAWIAYGHSFAVESEHDQAMAAYFTAAQLMKGCHLPMLYIGLEYGLTNNSKLAERFFSQALSIAPEDPFVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNE--VTVDKWEPLLNNLGHVCRKLKKYAEALDYHRQALVLIPQNASTYSAIGYIHSLMGNFENAVDYFHTALGLRRDDTFSVTMLGHCIE 524
The following BLAST results are available for this feature:
BLAST of TCONS_00017334-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CDC161.733e-16844.89Cell division cycle protein 16 homolog OS=Homo sap... [more]
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