TCONS_00017068-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00017068-protein
Unique NameTCONS_00017068-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length295

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00017068-protein ID=TCONS_00017068-protein|Name=TCONS_00017068-protein|organism=Clytia hemisphaerica|type=polypeptide|length=295bp
MVASRDHDNNNMNGYSSSSSEEDENIGYHFELVENDFQCIICHYVIRGFT
ELPCGHAGCKFCIEEWEKRKVACCECQKTYDKTKKNSSLYIDRTIKHQRK
AVCKQHEQGCTWQGSIADYKDQHRKECAFRNVRCRLCNQKVARHEKEGHK
LTCTHRLVNCTTCGGQYSFINKKKHEDEECKVRCDYWQYGCHEKVYKPHM
ERHLANSARRHIELVKAHYDRIVTELNTTVSLQSKHITELTTQLKVNKIP
MATSSSSPTVKQTVKPKTLPRPPIRIYENEEDKQQQQPTNPFRPA
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_009538XLOC_009538Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00017068TCONS_00017068Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING
IPR008974TRAF-like
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.5.300coord: 213..246
e-value: 0.0033
score: 16.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 251..295
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 30..83
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 31..89
e-value: 2.5E-10
score: 39.1
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 161..204
e-value: 0.012
score: 15.3
coord: 141..160
e-value: 0.15
score: 11.8
coord: 93..140
e-value: 8.3E-9
score: 35.0
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 39..77
score: 9.421
IPR008974TRAF-likeSUPERFAMILY49599TRAF domain-likecoord: 103..165

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00017068-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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