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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00017011-protein ID=TCONS_00017011-protein|Name=TCONS_00017011-protein|organism=Clytia hemisphaerica|type=polypeptide|length=523bp
MAASRDYDHNNTNGYSSSSSNEDENAGYPFDFLETDFQCIICTMVIRGFT
ELPCGHAGCKFCIEKWEKQKVACCECQESYDKTKKQESRYNDRKIKHERQ
ARCKQHEQGCTWQGSIADYKDQHRKRCGFRNVRCRLCNQKVDHQEKEGHK
LTCTHRLVNCTTCGAQYSFINKKKHEDEECKLPCDYYQYGCHEKVCKPNM
ERHLANSARRHIELVKAHYEKLISGKDKKITELKTTVNLQSEHITELTTQ
LERTKLPMATSSSSPTVKPAVKPKSFLRTFFERKNDKQQQQQQQQATNSF
QPASSPTVEQTVEPKTLPRPPIRIYEQEEDKQQQQPTKPIRPASAKWDGQ
KIHELVFQGETLTFVDVWKILKEKKFKKFGEIFQQNPNIVNSLRDGYDGK
TLLMLAVYEDRFDVFVHLMEYPQDFSLVNNNGWNVLHFVGRYGTARYLEM
FDQQTIKMLINGRNIYNETPLHYAAHYNKHDVIRWLLAKGANHELKNKDG
QRPDEQRACGGVTKEIFRSFRSS Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005515 |
protein binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR002110 | Ankyrin repeat | SMART | SM00248 | ANK_2a | coord: 398..427
e-value: 2.6
score: 17.0
coord: 466..495
e-value: 1.1E-4
score: 31.5 |
| IPR002110 | Ankyrin repeat | PROSITE | PS50088 | ANK_REPEAT | coord: 466..498
score: 12.396 |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type | GENE3D | 3.30.40.10 | | coord: 151..204
e-value: 0.0046
score: 16.6
coord: 95..150
e-value: 4.2E-7
score: 29.6 |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type | GENE3D | 3.30.40.10 | | coord: 37..94
e-value: 2.6E-10
score: 39.3 |
| IPR020683 | Ankyrin repeat-containing domain | GENE3D | 1.25.40.20 | | coord: 322..518
e-value: 2.6E-22
score: 78.6 |
| IPR020683 | Ankyrin repeat-containing domain | PFAM | PF12796 | Ank_2 | coord: 403..497
e-value: 3.7E-10
score: 40.2 |
| IPR020683 | Ankyrin repeat-containing domain | PROSITE | PS50297 | ANK_REP_REGION | coord: 398..503
score: 20.447 |
| IPR020683 | Ankyrin repeat-containing domain | SUPERFAMILY | 48403 | Ankyrin repeat | coord: 387..503 |
| None | No IPR available | GENE3D | 1.20.5.50 | | coord: 217..254
e-value: 1.0E-4
score: 21.5 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..24 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 284..320 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 326..345 |
| None | No IPR available | CDD | cd00204 | ANK | coord: 397..503
e-value: 3.15311E-19
score: 82.8166 |
| None | No IPR available | SUPERFAMILY | 57850 | RING/U-box | coord: 33..83 |
| IPR001841 | Zinc finger, RING-type | PROSITE | PS50089 | ZF_RING_2 | coord: 39..77
score: 9.45 |
| IPR001841 | Zinc finger, RING-type | CDD | cd00162 | RING | coord: 38..74
e-value: 0.0086941
score: 33.5732 |
Blast
The following BLAST results are available for this feature:
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