TCONS_00016977-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00016977-protein
Unique NameTCONS_00016977-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length386

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00016977-protein ID=TCONS_00016977-protein|Name=TCONS_00016977-protein|organism=Clytia hemisphaerica|type=polypeptide|length=386bp
XHEICRQQFKIASTISTYLATYHGRKIQDSFIDLGSYYEEYVKEKKKAIN
LYLYVDTPYMKIGFKWALEQNKSSDDDNDDTYQSGSSSTLIICPICHCTS
PPNTECVRCVQNSELEESLAADQVRPMEIEDGRVDDGQFEDDQFEDGQFE
DGQVDDGQFEDGQVDDGQVRNARLNFFNNIRMSQAEPIQPTTSFINSVQT
PISAVPSHPRQPTTSFVNSVQTPISAVSSHPRQPTTSSVNSVQTPATGAI
DTTSDLASSVFRHSLMKPAIKEWAVCSICTNEIEDSPAHLLSCKCRFHRI
CLEMWTEKSMNCPTCATKADTKYIDSELYDDIIEIWHYKFSDVVNIDLKD
RSDLSIRRSNLYTDTLRKIPRIFKKGLVPLNVTFTD
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_009503XLOC_009503Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00016977TCONS_00016977Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 276..315
e-value: 0.0014
score: 27.8
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 276..315
e-value: 1.3E-6
score: 28.5
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 276..315
score: 10.881
IPR001841Zinc finger, RING-typeCDDcd00162RINGcoord: 276..315
e-value: 3.90525E-5
score: 39.7364
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 262..364
e-value: 3.7E-11
score: 42.3
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 259..321

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00016977-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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