TCONS_00016924-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00016924-protein
Unique NameTCONS_00016924-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length584

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00016924-protein ID=TCONS_00016924-protein|Name=TCONS_00016924-protein|organism=Clytia hemisphaerica|type=polypeptide|length=584bp
MSFRSWIELESDPGLFTLLVYDFGVKGVEVEEIYDLSTQMEKHVFGLIFL
FKWTEERKTRRKAVVLEETFADEKVENEMFFAQQIIPNSCASHALLSVLL
NVPDVSLGYTLKQLRDSCKGFDSESKGYAIGNFWNLSVAHNNHGRAEQRW
STDRTKNLTAVRSMEAFHYVSYIPYKGRLLELDGLKAHPIDHGPWLDNEN
WTDKARRVIQDRIAFATGGELSHDIRYNLMAVVPEQRHLFKDKIDILRHN
KKVLIEGFKNLADKESFVINPLTNDASLKESDPLHPFPKKSKSGKRNKKS
VSFSDESPLSPDNFSNVSTITGTESVTHPLSDSDGDSDIESYRIKSILRG
KSPWVYVKGEESPKKDSTKDLKIEEEDAPKTETEIENEPSKSDMEIGILE
NVESTESKEKEDSISTLQIKTEKVDEESQSQQSEGVEQQEQSVERMTSLE
QDPAQAKVAEIDVKSLLDQERKIEKLCLEDLLKHQDQITLPDLQKSLQSL
DDQYKKLNTAYKEELEKIEKYKIDDCRRQHNYEPFVATFLGMLADQGHLT
TLLEQQNNASMKRSNAAGVGGKKTKTLYTFVDAG
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_009479XLOC_009479Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00016924TCONS_00016924Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001578Peptidase_C12_UCH
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Vocabulary: Molecular Function
TermDefinition
GO:0004843thiol-dependent ubiquitin-specific protease activity
Vocabulary: Biological Process
TermDefinition
GO:0006511ubiquitin-dependent protein catabolic process
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
cellular_component GO:0005622 intracellular
molecular_function GO:0004843 thiol-dependent ubiquitin-specific protease activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 490..524
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 421..451
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 278..338
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 359..392
NoneNo IPR availableCDDcd09617Peptidase_C12_UCH37_BAP1coord: 6..232
e-value: 3.25952E-91
score: 281.436
NoneNo IPR availableSUPERFAMILY54001Cysteine proteinasescoord: 4..234
IPR001578Peptidase C12, ubiquitin carboxyl-terminal hydrolaseGENE3D3.40.532.10coord: 2..237
e-value: 3.1E-69
score: 232.5
IPR001578Peptidase C12, ubiquitin carboxyl-terminal hydrolasePFAMPF01088Peptidase_C12coord: 6..213
e-value: 3.4E-61
score: 206.6

Blast
[Close]
BLAST of TCONS_00016924-protein vs. Swiss-Prot (Human)
Match: BAP1 (Ubiquitin carboxyl-terminal hydrolase BAP1 OS=Homo sapiens GN=BAP1 PE=1 SV=2)

HSP 1 Score: 338.576 bits (867), Expect = 2.163e-107
Identity = 152/260 (58.46%), Postives = 196/260 (75.38%), Query Frame = 0 
Query:    4 RSWIELESDPGLFTLLVYDFGVKGVEVEEIYDLSTQMEKHVFGLIFLFKWTEERKTRRKAVVL--EETFADEKVENEMFFAQQIIPNSCASHALLSVLLNVPDVSLGYTLKQLRDSCKGFDSESKGYAIGNFWNLSVAHNNHGRAEQRWSTDRTKNLTAVRSMEAFHYVSYIPYKGRLLELDGLKAHPIDHGPWLDNENWTDKARRVIQDRIAFATGGELSHDIRYNLMAVVPEQRHLFKDKIDILRHNKKVLIEGFKNL 261
            + W+ELESDPGLFTLLV DFGVKGV+VEEIYDL ++ +  V+G IFLFKW EER++RRK   L  + +  D+ + N MFFA Q+IPNSCA+HALLSVLLN   V LG TL +++D  KGF  ESKGYAIGN   L+ AHN+H R E R   ++   L+AVR+MEAFH+VSY+P  GRL ELDGLK +PIDHGPW ++E WTDKARRVI +RI  AT GE  HDIR+NLMAVVP++R  ++ ++ +L+ N++ ++E  + L
Sbjct:    3 KGWLELESDPGLFTLLVEDFGVKGVQVEEIYDLQSKCQGPVYGFIFLFKWIEERRSRRKVSTLVDDTSVIDDDIVNNMFFAHQLIPNSCATHALLSVLLNCSSVDLGPTLSRMKDFTKGFSPESKGYAIGNAPELAKAHNSHARPEPRHLPEKQNGLSAVRTMEAFHFVSYVPITGRLFELDGLKVYPIDHGPWGEDEEWTDKARRVIMERIGLATAGEPYHDIRFNLMAVVPDRRIKYEARLHVLKVNRQTVLEALQQL 262
The following BLAST results are available for this feature:
BLAST of TCONS_00016924-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
BAP12.163e-10758.46Ubiquitin carboxyl-terminal hydrolase BAP1 OS=Homo... [more]
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