TCONS_00016893-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00016893-protein
Unique NameTCONS_00016893-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length962

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00016893-protein ID=TCONS_00016893-protein|Name=TCONS_00016893-protein|organism=Clytia hemisphaerica|type=polypeptide|length=962bp
MTDSKYFTTTKKGEIYELKAELNQPKMDRKKEAVKKVIAIMTVGKDVSAL
FPDVINCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNTFARDCDDPNP
LIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHD
INSTLVEDQGFLELLRDLLSDSNPMVVANAVASLSEIADASPSAVQYFEI
NSATINKLLTALNECTEWGQIFILDSLANYSPRDEKEAQSICERVTPRLS
HANAAVVLSAVKVLMKLMEMMVQGSQFIQSLVKKLSPPLVTLLSSEPEVQ
YVALRNINLIVQKRPDILRNEIKAFFVKYNDPIYVKLEKLDIMIRLVSQQ
NIGQVLAELKEYATEVDVDFVRKSVRAIGRCAIKVEQSAEKCVTTLLDLI
QNKVNYVVQEAIVVLKDIFRRYPNKYESIISTLCENLDSLDEPEAKASMI
WIIGEYAERIDNADELLTTFLDGFSDENTQVQLQLLTAIVKLFLKRPTDT
QELVQQVLSLATQDSDNPDLRDRGYIYWRLLSTDPAAAKEVVLAEKPLIS
EETDLIEPSLLDELICHISSLASVYHRPPSSFVAGKSSQKRATLPARSGA
PDATPSVDTTPAADQVQQPTLSQVAGVQPAAPQPTTDSLLGDLLELGPSS
GGMPPPAQPGFGGGFGGGFGDVPAQPQPQQPAVDLLGGDLSMLSTPAPAP
SIGGGLIDTGSSAGGGGLNDLFSIQGALPGAGYVGPQTVLLPASKGKGLE
ISGTFARRQGAVFMDLTFTNRAMQAMGGFAIQFNKNSFGIAPSALQVQSP
IAPNTSAQTSLQITPAAGPIQKMDPINNLQVAIKNNIDIFYFSCAIPAHV
LFIESGKMDRKVFLDTWKDIPAANEVQNNVNTRGFNSDGIQNVLEANNIF
TIAKRTVEGQDMLYQSLRFTNGITVLSELKLVPGNASIQLSLKTTAMDVI
GIVQDIYQKILQ
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_009455XLOC_009455Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00016893TCONS_00016893Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015151B-adaptin_app_sub_C
IPR008152Clathrin_a/b/g-adaptin_app_Ig
IPR000225Armadillo
IPR011989ARM-like
IPR013037Clathrin_b-adaptin_app_Ig-like
IPR002553Clathrin/coatomer_adapt-like_N
IPR016342AP_complex_bsu_1_2_4
IPR009028Coatomer/calthrin_app_sub_C
IPR013041Coatomer/clathrin_app_Ig-like
IPR016024ARM-type_fold
Vocabulary: Biological Process
TermDefinition
GO:0006886intracellular protein transport
GO:0016192vesicle-mediated transport
GO:0015031protein transport
Vocabulary: Cellular Component
TermDefinition
GO:0030131clathrin adaptor complex
GO:0030117membrane coat
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008565protein transporter activity
GO:0005488binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006886 intracellular protein transport
biological_process GO:0015031 protein transport
biological_process GO:0016192 vesicle-mediated transport
cellular_component GO:0030131 clathrin adaptor complex
cellular_component GO:0030117 membrane coat
molecular_function GO:0005488 binding
molecular_function GO:0005515 protein binding
molecular_function GO:0008565 protein transporter activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015151Beta-adaptin appendage, C-terminal subdomainSMARTSM01020B2_adapt_app_C_2coord: 852..962
e-value: 1.4E-33
score: 127.5
IPR015151Beta-adaptin appendage, C-terminal subdomainPFAMPF09066B2-adapt-app_Ccoord: 854..961
e-value: 3.2E-28
score: 97.9
IPR008152Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomainSMARTSM00809alpha_adaptinc2coord: 733..843
e-value: 1.5E-9
score: 47.7
IPR008152Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomainPFAMPF02883Alpha_adaptinC2coord: 741..842
e-value: 8.9E-8
score: 32.3
IPR000225ArmadilloSMARTSM00185arm_5coord: 149..189
e-value: 0.45
score: 19.6
coord: 274..312
e-value: 79.0
score: 6.3
NoneNo IPR availableGENE3D3.30.310.10coord: 848..962
e-value: 4.5E-31
score: 106.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 582..684
NoneNo IPR availableCDDcd00020ARMcoord: 118..231
e-value: 6.68647E-8
score: 50.7759
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1..592
e-value: 9.3E-158
score: 525.7
IPR013037Clathrin adaptor, beta-adaptin, appendage, Ig-like subdomainGENE3D2.60.40.1150coord: 735..847
e-value: 6.0E-43
score: 144.8
IPR002553Clathrin/coatomer adaptor, adaptin-like, N-terminalPFAMPF01602Adaptin_Ncoord: 16..533
e-value: 1.2E-155
score: 519.0
IPR016342AP-1, 2,4 complex subunit betaPIRSFPIRSF002291Beta_adaptincoord: 1..794
e-value: 9.5E-302
score: 1000.8
IPR009028Coatomer/calthrin adaptor appendage, C-terminal subdomainSUPERFAMILY55711Subdomain of clathrin and coatomer appendage domaincoord: 851..961
IPR013041Coatomer/clathrin adaptor appendage, Ig-like subdomainSUPERFAMILY49348Clathrin adaptor appendage domaincoord: 734..849
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 6..582

Blast
[Close]
BLAST of TCONS_00016893-protein vs. Swiss-Prot (Human)
Match: AP2B1 (AP-2 complex subunit beta OS=Homo sapiens GN=AP2B1 PE=1 SV=1)

HSP 1 Score: 1321.22 bits (3418), Expect = 0.000e+0
Identity = 660/977 (67.55%), Postives = 769/977 (78.71%), Query Frame = 0 
Query:    1 MTDSKYFTTTKKGEIYELKAELNQPKMDRKKEAVKKVIAIMTVGKDVSALFPDVINCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNTFARDCDDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINSTLVEDQGFLELLRDLLSDSNPMVVANAVASLSEIADASPSAVQYFEINSATINKLLTALNECTEWGQIFILDSLANYSPRDEKEAQSICERVTPRLSHANAAVVLSAVKVLMKLMEMMVQGSQFIQSLVKKLSPPLVTLLSSEPEVQYVALRNINLIVQKRPDILRNEIKAFFVKYNDPIYVKLEKLDIMIRLVSQQNIGQVLAELKEYATEVDVDFVRKSVRAIGRCAIKVEQSAEKCVTTLLDLIQNKVNYVVQEAIVVLKDIFRRYPNKYESIISTLCENLDSLDEPEAKASMIWIIGEYAERIDNADELLTTFLDGFSDENTQVQLQLLTAIVKLFLKRPTDTQELVQQVLSLATQDSDNPDLRDRGYIYWRLLSTDPAAAKEVVLAEKPLISEETDLIEPSLLDELICHISSLASVYHRPPSSFVAGKSSQKRATLPARSGAPDATPSVDTTPAADQVQQPTLSQVAGVQPAAPQPTTDSLLGDLLELGPSSGGMPPPAQPGFGGGFGGGFGDVPAQPQPQQPAVDLLGGDLSML-----------STPAPAPSIGGGLIDTGSSAGGGGLNDLFSIQ---GALPGAGYVGPQTVLLPASKGKGLEISGTFARRQGAVFMDLTFTNRAMQAMGGFAIQFNKNSFGIAPSA-LQVQSPIAPNTSAQTSLQITPAAGPIQKMDPINNLQVAIKNNIDIFYFSCAIPAHVLFIESGKMDRKVFLDTWKDIPAANEVQNNVNTRGFNSDGIQNVLEANNIFTIAKRTVEGQDMLYQSLRFTNGITVLSELKLVPGNASIQLSLKTTAMDVIGIVQDIYQKILQ 962
            MTDSKYFTT KKGEI+ELKAELN  K +++KEAVKKVIA MTVGKDVS+LFPDV+NCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVN+F +DC+DPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDIN+ +VEDQGFL+ LRDL++DSNPMVVANAVA+LSEI+++ P++    ++N   INKLLTALNECTEWGQIFILD L+NY+P+D++EAQSICERVTPRLSHAN+AVVLSAVKVLMK +E++ + S +   L+KKL+PPLVTLLS EPEVQYVALRNINLIVQKRP+IL+ EIK FFVKYNDPIYVKLEKLDIMIRL SQ NI QVLAELKEYATEVDVDFVRK+VRAIGRCAIKVEQSAE+CV+TLLDLIQ KVNYVVQEAIVV++DIFR+YPNKYESII+TLCENLDSLDEP+A+A+MIWI+GEYAERIDNADELL +FL+GF DE+TQVQL LLTAIVKLFLK+P++TQELVQQVLSLATQDSDNPDLRDRGYIYWRLLSTDP  AKEVVL+EKPLISEETDLIEP+LLDELICHI SLASVYH+PP++FV G     R  LP   G+ DA  S   T  A  ++QP   QV   Q                     +  + PP              +VP     Q  AVDLLGG L  L           +T AP+P+          +    GLNDLF +    G  PG GYV P+ V LPA K KGLEISGTF  RQG ++M++ FTN+A+Q M  FAIQFNKNSFG+ PS  L + +P+ PN S   SL +    GP+ KM+P+NNLQVA+KNNID+FYFSC IP +VLF+E GKM+R+VFL TWKDIP  NE+Q  +     N+D + + L+ NN++TIAKR VEGQDMLYQSL+ TNGI +L+EL++ PGN +  LSLK  A +V   +  +Y  IL+
Sbjct:    1 MTDSKYFTTNKKGEIFELKAELNNEKKEKRKEAVKKVIAAMTVGKDVSSLFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANAVAALSEISESHPNS-NLLDLNPQNINKLLTALNECTEWGQIFILDCLSNYNPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFLELLPKDSDYYNMLLKKLAPPLVTLLSGEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIVVIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERIDNADELLESFLEGFHDESTQVQLTLLTAIVKLFLKKPSETQELVQQVLSLATQDSDNPDLRDRGYIYWRLLSTDPVTAKEVVLSEKPLISEETDLIEPTLLDELICHIGSLASVYHKPPNAFVEGSHGIHRKHLPIHHGSTDAGDSPVGTTTATNLEQP---QVIPSQGDLLGDLL-------------NLDLGPPV-------------NVPQVSSMQMGAVDLLGGGLDSLVGQSFIPSSVPATFAPSPT---------PAVVSSGLNDLFELSTGIGMAPG-GYVAPKAVWLPAVKAKGLEISGTFTHRQGHIYMEMNFTNKALQHMTDFAIQFNKNSFGVIPSTPLAIHTPLMPNQSIDVSLPLN-TLGPVMKMEPLNNLQVAVKNNIDVFYFSCLIPLNVLFVEDGKMERQVFLATWKDIPNENELQFQIKECHLNADTVSSKLQNNNVYTIAKRNVEGQDMLYQSLKLTNGIWILAELRIQPGNPNYTLSLKCRAPEVSQYIYQVYDSILK 936
The following BLAST results are available for this feature:
BLAST of TCONS_00016893-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
AP2B10.000e+067.55AP-2 complex subunit beta OS=Homo sapiens GN=AP2B1... [more]
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