TCONS_00016859-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00016859-protein
Unique NameTCONS_00016859-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length267

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00016859-protein ID=TCONS_00016859-protein|Name=TCONS_00016859-protein|organism=Clytia hemisphaerica|type=polypeptide|length=267bp
MTSLNVLLEAAKAVDIDSPSIKRKRNSSSRSKRDILERTPGGGNRQTHNI
LEKNRRAELKTFFQKLKETVPILQNRPKASNVSVLTESMKYIQELNEIDK
QHSLEITRLRRCRMCLEERIKMLKEEIDKLPPENRPKIIFKETPIEPERE
STDHANPSPTTSTGAPPKKPKKEMVSIEIQANEEDIRDALPESYADEKTF
DQPLPDVLPAHETLKCQLHTEPSSEERLTNLKDKLMRKRVLESMLDGDED
SENDEDVLKIVCEELKI
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_009439XLOC_009439Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00016859TCONS_00016859Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011598bHLH_dom
IPR018065Ribosomal_L34e_CS
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0046983 protein dimerization activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 106..126
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 142..172
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 20..47
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSMARTSM00353finuluscoord: 49..101
e-value: 1.4E-9
score: 47.8
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPFAMPF00010HLHcoord: 45..95
e-value: 2.0E-12
score: 46.8
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainGENE3D4.10.280.10coord: 44..130
e-value: 6.9E-13
score: 48.1
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROSITEPS50888BHLHcoord: 43..95
score: 13.586
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainCDDcd00083HLHcoord: 45..97
e-value: 1.6771E-8
score: 48.7495
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSUPERFAMILY47459HLH, helix-loop-helix DNA-binding domaincoord: 42..118
IPR018065Ribosomal protein L34e, conserved sitePROSITEPS01145RIBOSOMAL_L34Ecoord: 29..42

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00016859-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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